RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 PKN1Q16512 942 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 STOX1Q6ZVD7 989 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 ASCL5Q7RTU5 278 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 ZNF589Q86UQ0 364 aaPredicted RBP9.4□□□□□ -0.9
CSTF1-203ENST00000428552 VSIG10LQ86VR7 867 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 MCF2L2Q86YR7 1114 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 EFHBQ8N7U6 833 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 SPPL3Q8TCT6 385 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 FAM227BQ96M60 508 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 ZKSCAN3Q9BRR0 538 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
CSTF1-203ENST00000428552 TOMM22Q9NS69 142 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 SETD4Q9NVD3 440 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 USP15Q9Y4E8 981 aaPredicted RBP9.4□□□□□ -0.9
CSTF1-203ENST00000428552 PCDHGC5Q9Y5F6 944 aa9.4□□□□□ -0.9
CSTF1-203ENST00000428552 MRPL42Q9Y6G3 142 aaKnown RBP9.4□□□□□ -0.9
CSTF1-203ENST00000428552 ENPP3O14638 875 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 DGKIO75912 1065 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 CFBP00751 764 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 PDGFBP01127 241 aaPredicted RBP9.39□□□□□ -0.91
CSTF1-203ENST00000428552 HSPD1P10809 573 aaKnown RBP9.39□□□□□ -0.91
CSTF1-203ENST00000428552 MYCLP12524 364 aaPredicted RBP9.39□□□□□ -0.91
CSTF1-203ENST00000428552 AVPR2P30518 371 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 NDUFV1P49821 464 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 RBM10P98175 930 aaKnown RBP9.39□□□□□ -0.91
CSTF1-203ENST00000428552 FOXK2Q01167 660 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 LPIN1Q14693 890 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 PGM5Q15124 567 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 SLC35G1Q2M3R5 365 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 TRIM50Q86XT4 487 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 SUGP1Q8IWZ8 645 aaKnown RBP9.39□□□□□ -0.91
CSTF1-203ENST00000428552 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 VN1R2Q8NFZ6 395 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 LMBR1Q8WVP7 490 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 SUSD6Q92537 303 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 PLVAPQ9BX97 442 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 BARX2Q9UMQ3 279 aaPredicted RBP9.39□□□□□ -0.91
CSTF1-203ENST00000428552 MRPL11Q9Y3B7 192 aaKnown RBP9.39□□□□□ -0.91
CSTF1-203ENST00000428552 RWDD3Q9Y3V2 267 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 DNAH14Q0VDD8 3507 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 TTC3P53804 2025 aa9.39□□□□□ -0.91
CSTF1-203ENST00000428552 DOCK5Q9H7D0 1870 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 PLXNA4Q9HCM2 1894 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 H0Y858 1186 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 TGFB3P10600 412 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 GHRP10912 638 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 HOXA13P31271 388 aaPredicted RBP9.38□□□□□ -0.91
CSTF1-203ENST00000428552 ICAM3P32942 547 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 KCNV1Q6PIU1 500 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 RTN4RL1Q86UN2 441 aaPredicted RBP9.38□□□□□ -0.91
CSTF1-203ENST00000428552 DGKHQ86XP1 1220 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 MIER1Q8N108 512 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 P2RX5Q93086 422 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 MTMR8Q96EF0 704 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 GPR20Q99678 358 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 PHF7Q9BWX1 381 aaPredicted RBP9.38□□□□□ -0.91
CSTF1-203ENST00000428552 CHMP4BQ9H444 224 aaKnown RBP9.38□□□□□ -0.91
CSTF1-203ENST00000428552 TLR9Q9NR96 1032 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 HELLSQ9NRZ9 838 aa9.38□□□□□ -0.91
CSTF1-203ENST00000428552 MYH6P13533 1939 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 PRR23AA6NEV1 266 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 MX1P20591 662 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 NRIP1P48552 1158 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 MRPS9P82933 396 aaKnown RBP9.37□□□□□ -0.91
CSTF1-203ENST00000428552 BTG3Q14201 252 aaPredicted RBP9.37□□□□□ -0.91
CSTF1-203ENST00000428552 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 STAG2Q8N3U4 1231 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 KLHL23Q8NBE8 558 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 ATOH1Q92858 354 aaPredicted RBP9.37□□□□□ -0.91
CSTF1-203ENST00000428552 AGO3Q9H9G7 860 aaKnown RBP9.37□□□□□ -0.91
CSTF1-203ENST00000428552 LAMA4Q16363 1823 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 CACNA1AO00555 2505 aa9.37□□□□□ -0.91
CSTF1-203ENST00000428552 FRMPD4Q14CM0 1322 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 CCDC171Q6TFL3 1326 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 SPATA31C2B4DYI2 1134 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 PCP11498 1178 aaKnown RBP9.36□□□□□ -0.91
CSTF1-203ENST00000428552 ATF7P17544 494 aaPredicted RBP9.36□□□□□ -0.91
CSTF1-203ENST00000428552 GATMP50440 423 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 ARHGAP4P98171 946 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 KCNC3Q14003 757 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 PTPN21Q16825 1174 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 MCMDC2Q4G0Z9 681 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 FBXO47Q5MNV8 452 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 MARCH8Q5T0T0 291 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 METTL7BQ6UX53 244 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 MFSD6Q6ZSS7 791 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 CYFIP1Q7L576 1253 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 RBM23Q86U06 439 aaKnown RBP9.36□□□□□ -0.91
CSTF1-203ENST00000428552 ENAHQ8N8S7 591 aaPredicted RBP9.36□□□□□ -0.91
CSTF1-203ENST00000428552 POF1BQ8WVV4 589 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 SPOCK2Q92563 424 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 RPGRIP1Q96KN7 1286 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 INPP4AQ96PE3 977 aaPredicted RBP9.36□□□□□ -0.91
CSTF1-203ENST00000428552 AMNQ9BXJ7 453 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 USP26Q9BXU7 913 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 S1PR5Q9H228 398 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 MLXIPQ9HAP2 919 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms