RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 IFT20Q8IY31 132 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 TSEN2Q8NCE0 465 aaKnown RBP8.66□□□□□ -1.02
LRCH3-204ENST00000428136 GOLGA6AQ9NYA3 693 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 SIPA1L1O43166 1804 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 MAGEA9P43362 315 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 POLR2FP61218 127 aaKnown RBP8.66□□□□□ -1.02
LRCH3-204ENST00000428136 ATP2B2Q01814 1243 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 BMT2Q1RMZ1 405 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 Q4G0T1 1027 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 CCDC181Q5TID7 509 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 IRF2BP2Q7Z5L9 587 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 EMILIN3Q9NT22 766 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.66□□□□□ -1.02
LRCH3-204ENST00000428136 STK24Q9Y6E0 443 aa8.66□□□□□ -1.02
LRCH3-204ENST00000428136 GRIN2DO15399 1336 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 E9PMD0 336 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 PALMO75781 387 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 SERPINB2P05120 415 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 KLRC1P26715 233 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 CXCR5P32302 372 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 PRKCIP41743 596 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 MMP14P50281 582 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 SLC7A5Q01650 507 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 AP3B2Q13367 1082 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 CDC37Q16543 378 aaPredicted RBP8.65□□□□□ -1.02
LRCH3-204ENST00000428136 C8orf74Q6P047 294 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 HHIPL2Q6UWX4 724 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 ETNPPLQ8TBG4 499 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 CCDC17Q96LX7 622 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 DRC1Q96MC2 740 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 GDAP1L1Q96MZ0 367 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 TANGO6Q9C0B7 1094 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 EHD2Q9NZN4 543 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 BZW2Q9Y6E2 419 aaKnown RBP8.65□□□□□ -1.02
LRCH3-204ENST00000428136 A0A087X0T9 212 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 TRIM66O15016 1216 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 GLI1P08151 1106 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 FAM228BP0C875 321 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 ADAM9Q13443 819 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 TTMPQ5BVD1 217 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 GPBP1Q86WP2 473 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 CERS5Q8N5B7 392 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 ANKRD13CQ8N6S4 541 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 DCAF4Q8WV16 495 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 TBC1D5Q92609 795 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 DHX36Q9H2U1 1008 aaKnown RBP8.65□□□□□ -1.02
LRCH3-204ENST00000428136 NLRC4Q9NPP4 1024 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 SMARCAL1Q9NZC9 954 aa8.65□□□□□ -1.02
LRCH3-204ENST00000428136 BUB1O43683 1085 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 MED24O75448 989 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 CPP00450 1065 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 HOXD13P35453 343 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 KCNH2Q12809 1159 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 GIT2Q14161 759 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 SYT2Q8N9I0 419 aaPredicted RBP8.65□□□□□ -1.03
LRCH3-204ENST00000428136 PIK3R5Q8WYR1 880 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 MS4A14Q96JA4 679 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 MXD3Q9BW11 206 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 MRIQ9BWK5 157 aa8.65□□□□□ -1.03
LRCH3-204ENST00000428136 PDXKO00764 312 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 MEIS2O14770 477 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 CETN3O15182 167 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 EIF3HO15372 352 aaKnown RBP eCLIP8.64□□□□□ -1.03
LRCH3-204ENST00000428136 GTF2IP78347 998 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 ASIC2Q16515 512 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 TDRD12Q587J7 1177 aaKnown RBP8.64□□□□□ -1.03
LRCH3-204ENST00000428136 DNAJC21Q5F1R6 531 aaKnown RBP8.64□□□□□ -1.03
LRCH3-204ENST00000428136 HERC4Q5GLZ8 1057 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-204ENST00000428136 CLEC10AQ8IUN9 316 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 LRRC57Q8N9N7 239 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 GJA10Q969M2 543 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 TRERF1Q96PN7 1200 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 CAPS2Q9BXY5 557 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 LRRC4BQ9NT99 713 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 NYAP2Q9P242 653 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 ATXN2Q99700 1313 aaKnown RBP8.64□□□□□ -1.03
LRCH3-204ENST00000428136 NPHP3-ACAD11A0A0J9YXS1 232 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 POTEB3A0JP26 581 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 POTECB2RU33 542 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 ZEB2O60315 1214 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 HSF2BPO75031 334 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 SPATA31C1P0DKV0 1188 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 RPA1P27694 616 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 JAM2P57087 298 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 KLHL30Q0D2K2 578 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 PAK2Q13177 524 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 NFIL3Q16649 462 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 QRICH1Q2TAL8 776 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 CDC42EP5Q6NZY7 148 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 POTEBQ6S5H4 581 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 SLFN11Q7Z7L1 901 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 CATSPER3Q86XQ3 398 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 TEX2Q8IWB9 1127 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 USP38Q8NB14 1042 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 ACTRT1Q8TDG2 376 aa8.64□□□□□ -1.03
LRCH3-204ENST00000428136 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms