RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 COPS5Q92905 334 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.741e-6■□□□□ 10.4
SMC1A-203ENST00000428014 ZSCAN31Q96LW9 406 aaPredicted RBP10.42□□□□□ -0.74
SMC1A-203ENST00000428014 GPR20Q99678 358 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 HIPK3Q9H422 1215 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 TUT1Q9H6E5 874 aaKnown RBP10.42□□□□□ -0.74
SMC1A-203ENST00000428014 SH2B1Q9NRF2 756 aaPredicted RBP10.42□□□□□ -0.74
SMC1A-203ENST00000428014 KCNH7Q9NS40 1196 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 MYH7BA7E2Y1 1941 aa10.42□□□□□ -0.74
SMC1A-203ENST00000428014 IGLV3-22A0A075B6J6 115 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 IGKV6D-21A0A0A0MT36 114 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 SEC24BO95487 1268 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 LGALS2P05162 132 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 MYL3P08590 195 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 SYN1P17600 705 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 PSEN2P49810 448 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 ADAM17P78536 824 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 SCRN1Q12765 414 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 MFSD10Q14728 455 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 TAF2Q6P1X5 1199 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 SH3RF1Q7Z6J0 888 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 SMAP1Q8IYB5 467 aaPredicted RBP10.41□□□□□ -0.74
SMC1A-203ENST00000428014 C7orf31Q8N865 590 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 RDM1Q8NG50 284 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 BADQ92934 168 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 GTF3C6Q969F1 213 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 MBOAT7Q96N66 472 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 RIT2Q99578 217 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 SMARCAD1Q9H4L7 1026 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 JPH1Q9HDC5 661 aaPredicted RBP10.41□□□□□ -0.74
SMC1A-203ENST00000428014 IL23AQ9NPF7 189 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 ERAP1Q9NZ08 941 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 PCDHA4Q9UN74 947 aa10.41□□□□□ -0.74
SMC1A-203ENST00000428014 DDX49Q9Y6V7 483 aaKnown RBP10.41□□□□□ -0.74
SMC1A-203ENST00000428014 MBLAC1A4D2B0 266 aaPredicted RBP10.4□□□□□ -0.74
SMC1A-203ENST00000428014 BAIAP3O94812 1187 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 CXCL10P02778 98 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 GCFC2P16383 781 aaKnown RBP10.4□□□□□ -0.74
SMC1A-203ENST00000428014 ITGB8P26012 769 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 MCM2P49736 904 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 AK2P54819 239 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 KIAA0753Q2KHM9 967 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 Q4G0T1 1027 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 ZNF746Q6NUN9 644 aaPredicted RBP10.4□□□□□ -0.74
SMC1A-203ENST00000428014 KRT25Q7Z3Z0 450 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 SERINC5Q86VE9 423 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 PHOSPHO2Q8TCD6 241 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 PIBF1Q8WXW3 757 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 HERVK_113Q902F9 699 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 PHKBQ93100 1093 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 SDF4Q9BRK5 362 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 PHF20Q9BVI0 1012 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 UPF2Q9HAU5 1272 aaKnown RBP10.4□□□□□ -0.74
SMC1A-203ENST00000428014 PRDM5Q9NQX1 630 aaPredicted RBP10.4□□□□□ -0.74
SMC1A-203ENST00000428014 SLC9A2Q9UBY0 812 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 TPCN1Q9ULQ1 816 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 LIMCH1Q9UPQ0 1083 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 SQORQ9Y6N5 450 aa10.4□□□□□ -0.74
SMC1A-203ENST00000428014 TANC1Q9C0D5 1861 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 RRN3P2A6NIE6 340 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 TBX3O15119 743 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 NEK4P51957 841 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 NLRP5P59047 1200 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 CCT2P78371 535 aaKnown RBP10.39□□□□□ -0.75
SMC1A-203ENST00000428014 HMGN5P82970 282 aaKnown RBP10.39□□□□□ -0.75
SMC1A-203ENST00000428014 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-203ENST00000428014 KRT76Q01546 638 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 ORC2Q13416 577 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-203ENST00000428014 RABEP1Q15276 862 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 NPY5RQ15761 445 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 PTGISQ16647 500 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 UBE2SQ16763 222 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 PPP4R3AQ6IN85 833 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 CYFIP1Q7L576 1253 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 RAB11FIP4Q86YS3 637 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 BLIDQ8IZY5 108 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 RETREG2Q8NC44 543 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 CTAGE1Q96RT6 745 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 AGO4Q9HCK5 861 aaKnown RBP10.39□□□□□ -0.75
SMC1A-203ENST00000428014 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-203ENST00000428014 NAP1L2Q9ULW6 460 aaPredicted RBP10.39□□□□□ -0.75
SMC1A-203ENST00000428014 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 COL1A2P08123 1366 aa10.39□□□□□ -0.75
SMC1A-203ENST00000428014 KAT6AQ92794 2004 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.38□□□□□ -0.75
SMC1A-203ENST00000428014 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.38□□□□□ -0.75
SMC1A-203ENST00000428014 GSTTP1A0A1W2PQM5 241 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 FAM86B1E9PN63 330 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 IPO5O00410 1097 aaKnown RBP10.38□□□□□ -0.75
SMC1A-203ENST00000428014 DHX15O43143 795 aaKnown RBP10.38□□□□□ -0.75
SMC1A-203ENST00000428014 ATP9AO75110 1047 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 FAM86B2P0C5J1 330 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 IQCF3P0C7M6 154 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 ACTN1P12814 892 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 SELPP16109 830 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 SFNP31947 248 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms