RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CLK2P49760 499 aaKnown RBP21.04■□□□□ 0.96
PSPC1-202ENST00000427943 DEFB103AP81534 67 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 PFKFB3Q16875 520 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-202ENST00000427943 TMCO2Q7Z6W1 182 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-202ENST00000427943 HERC6Q8IVU3 1022 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 USP38Q8NB14 1042 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 CYP2W1Q8TAV3 490 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 PHKBQ93100 1093 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 MXRA8Q9BRK3 442 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 AGXT2Q9BYV1 514 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 A0A0C4DFX4 3053 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 LOXHD1Q8IVV2 1947 aa21.04■□□□□ 0.96
PSPC1-202ENST00000427943 FOSP01100 380 aaPredicted RBP21.03■□□□□ 0.96
PSPC1-202ENST00000427943 CTSHP09668 335 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 MARK3P27448 753 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 ARHGAP4P98171 946 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 AP3B2Q13367 1082 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 ADGRE1Q14246 886 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 JAKMIP3Q5VZ66 844 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 PHOSPHO2Q8TCD6 241 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 LMBR1Q8WVP7 490 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 SEPT1Q8WYJ6 367 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 KCNH7Q9NS40 1196 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 WDR81Q562E7 1941 aa21.03■□□□□ 0.96
PSPC1-202ENST00000427943 RSPH10B2B2RC85 870 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 DLL1O00548 723 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 ADAMTS3O15072 1205 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 ARHGEF15O94989 841 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 RSPH10BP0C881 870 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 ARP10275 920 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 SREBF1P36956 1147 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 PKN1Q16512 942 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 FBXL16Q8N461 479 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 PPM1EQ8WY54 764 aa21.02■□□□□ 0.96
PSPC1-202ENST00000427943 NCOA5Q9HCD5 579 aaKnown RBP21.02■□□□□ 0.96
PSPC1-202ENST00000427943 JPH1Q9HDC5 661 aaPredicted RBP21.02■□□□□ 0.96
PSPC1-202ENST00000427943 MAFGO15525 162 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 GNAT1P11488 350 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 IGFBP4P22692 258 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 CCT2P78371 535 aaKnown RBP21.01■□□□□ 0.95
PSPC1-202ENST00000427943 ADAM17P78536 824 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 TOB2Q14106 344 aaPredicted RBP21.01■□□□□ 0.95
PSPC1-202ENST00000427943 RUFY3Q7L099 469 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 TEX2Q8IWB9 1127 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 GLG1Q92896 1179 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 GLT8D2Q9H1C3 349 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 CERS4Q9HA82 394 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 PPP4R2Q9NY27 417 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 SLC9A2Q9UBY0 812 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 MYH9P35579 1960 aaKnown RBP21.01■□□□□ 0.95
PSPC1-202ENST00000427943 EMSYQ7Z589 1322 aa21.01■□□□□ 0.95
PSPC1-202ENST00000427943 TRANK1O15050 2925 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 PRPF3O43395 683 aaKnown RBP21■□□□□ 0.95
PSPC1-202ENST00000427943 EPB41L2O43491 1005 aaKnown RBP21■□□□□ 0.95
PSPC1-202ENST00000427943 LGR5O75473 907 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 PDIA3P30101 505 aaKnown RBP21■□□□□ 0.95
PSPC1-202ENST00000427943 CEP55Q53EZ4 464 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 SLC26A6Q9BXS9 759 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 OSBPL7Q9BZF2 842 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 ZSWIM6Q9HCJ5 1215 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 ERAP1Q9NZ08 941 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 NRCAMQ92823 1304 aa21■□□□□ 0.95
PSPC1-202ENST00000427943 ABHD14A-ACY1A0A1B0GW23 586 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 ESYT2A0FGR8 921 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 TLL1O43897 1013 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 ZNF76P36508 570 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 AKAP17AQ02040 695 aaKnown RBP20.99■□□□□ 0.95
PSPC1-202ENST00000427943 PPFIA1Q13136 1202 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 ITGB3BPQ13352 177 aaPredicted RBP20.99■□□□□ 0.95
PSPC1-202ENST00000427943 IKBKEQ14164 716 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 NTRK3Q16288 839 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 DBF4BQ8NFT6 615 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 PCYT2Q99447 389 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 SDF4Q9BRK5 362 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 LARP6Q9BRS8 491 aaKnown RBP20.99■□□□□ 0.95
PSPC1-202ENST00000427943 UPF3BQ9BZI7 483 aaKnown RBP20.99■□□□□ 0.95
PSPC1-202ENST00000427943 ZMYND12Q9H0C1 365 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 AGO4Q9HCK5 861 aaKnown RBP20.99■□□□□ 0.95
PSPC1-202ENST00000427943 NFASCO94856 1347 aa20.99■□□□□ 0.95
PSPC1-202ENST00000427943 REV3LO60673 3130 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 LCHNA4D1U4 455 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 DDX39AO00148 427 aaKnown RBP20.98■□□□□ 0.95
PSPC1-202ENST00000427943 RFXAPO00287 272 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 GRIK4Q16099 956 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 RUFY4Q6ZNE9 571 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 SPRED2Q7Z698 418 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 REXO1Q8N1G1 1221 aaKnown RBP20.98■□□□□ 0.95
PSPC1-202ENST00000427943 RASGRP4Q8TDF6 673 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 CCDC12Q8WUD4 166 aaPredicted RBP20.98■□□□□ 0.95
PSPC1-202ENST00000427943 UIMC1Q96RL1 719 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 ZBED2Q9BTP6 218 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 RNF26Q9BY78 433 aaPredicted RBP20.98■□□□□ 0.95
PSPC1-202ENST00000427943 SMARCAD1Q9H4L7 1026 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 C6orf50Q9HD87 102 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 PRDM6Q9NQX0 595 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 CYP46A1Q9Y6A2 500 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 NLRC5Q86WI3 1866 aa20.98■□□□□ 0.95
PSPC1-202ENST00000427943 FAM86B1E9PN63 330 aa20.97■□□□□ 0.95
PSPC1-202ENST00000427943 MEIS1O00470 390 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms