RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TRERF1Q96PN7 1200 aa24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 TEKT3Q9BXF9 490 aa24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 NAA15Q9BXJ9 866 aaKnown RBP24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 WDR11Q9BZH6 1224 aa24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 ABHD10Q9NUJ1 306 aa24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 SLITRK3O94933 977 aa24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 FGFR1OPO95684 399 aaKnown RBP24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 RPS6P62753 249 aaKnown RBP24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 LRRC55Q6ZSA7 311 aa24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 KRT26Q7Z3Y9 468 aa24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 NELFCDQ8IXH7 590 aa24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 PIGOQ8TEQ8 1089 aa24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 DESI2Q9BSY9 194 aa24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 PKD2L1Q9P0L9 805 aa24.14■■□□□ 1.46
CNEP1R1-202ENST00000427478 DDX39AO00148 427 aaKnown RBP24.14■■□□□ 1.45
CNEP1R1-202ENST00000427478 ZCWPW2Q504Y3 356 aa24.14■■□□□ 1.45
CNEP1R1-202ENST00000427478 RUSC1Q9BVN2 902 aa24.14■■□□□ 1.45
CNEP1R1-202ENST00000427478 TBC1D8BQ0IIM8 1120 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 RAD9BQ6WBX8 426 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 SCFD1Q8WVM8 642 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 C12orf42Q96LP6 360 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 TAAR1Q96RJ0 339 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 FDX1P10109 184 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 EIF2AK2P19525 551 aaKnown RBP24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 KRT9P35527 623 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 SUPT20HL1Q3ZLR7 823 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 SFR1Q86XK3 245 aa24.13■■□□□ 1.45
CNEP1R1-202ENST00000427478 SYCP1Q15431 976 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 PCNX4Q63HM2 1172 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 FOXR2Q6PJQ5 311 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 DLK2Q6UY11 383 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 NSMFQ6X4W1 530 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 SYT10Q6XYQ8 523 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 RNF207Q6ZRF8 634 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 KIF18AQ8NI77 898 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 KCNH7Q9NS40 1196 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 MAP3K20Q9NYL2 800 aaKnown RBP24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 RNF181Q9P0P0 153 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 PNMA2Q9UL42 364 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 RIPK3Q9Y572 518 aa24.12■■□□□ 1.45
CNEP1R1-202ENST00000427478 TTC26A0AVF1 554 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 RSPH10B2B2RC85 870 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 C19orf81C9J6K1 198 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 RSPH10BP0C881 870 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 BCRP11274 1271 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 GTF2F1P35269 517 aaKnown RBP eCLIP24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 KLK7P49862 253 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 MRPS9P82933 396 aaKnown RBP24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 KCTD17Q8N5Z5 321 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 RIT2Q99578 217 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 RNF146Q9NTX7 359 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 FRMPD4Q14CM0 1322 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 LOXHD1Q8IVV2 1947 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 DYNC1I1O14576 645 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 ZBTB39O15060 712 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 FECHP22830 423 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 CASP5P51878 434 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 TKFCQ3LXA3 575 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 NOL9Q5SY16 702 aaKnown RBP24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 B3GNT9Q6UX72 402 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.11■■□□□ 1.456e-7■■■□□ 17
CNEP1R1-202ENST00000427478 UBIAD1Q9Y5Z9 338 aa24.11■■□□□ 1.45
CNEP1R1-202ENST00000427478 TRAF5O00463 557 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 KIF20AO95235 890 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 FKBP3Q00688 224 aaKnown RBP24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 PGM5Q15124 567 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 EPHA7Q15375 998 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 VWA3BQ502W6 1294 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 FKBP15Q5T1M5 1219 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 RINT1Q6NUQ1 792 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 NIPA1Q7RTP0 329 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 REPS2Q8NFH8 660 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 PCMTD1Q96MG8 357 aaPredicted RBP24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 POLD4Q9HCU8 107 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 WRAP73Q9P2S5 460 aaPredicted RBP24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 OTOFQ9HC10 1997 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 TBCAO75347 108 aaKnown RBP24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 ERCC3P19447 782 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 DSG3P32926 999 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 ERVK-24P63145 666 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 MAN2A1Q16706 1144 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 SNRNP48Q6IEG0 339 aaKnown RBP24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 SAMD3Q8N6K7 520 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 PURBQ96QR8 312 aaKnown RBP24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 KCTD10Q9H3F6 313 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 TMOD4Q9NZQ9 345 aa24.1■■□□□ 1.45
CNEP1R1-202ENST00000427478 USP2O75604 605 aaPredicted RBP24.09■■□□□ 1.45
CNEP1R1-202ENST00000427478 BANK1Q8NDB2 785 aa24.09■■□□□ 1.45
CNEP1R1-202ENST00000427478 RMDN3Q96TC7 470 aa24.09■■□□□ 1.45
CNEP1R1-202ENST00000427478 AGO4Q9HCK5 861 aaKnown RBP24.09■■□□□ 1.45
CNEP1R1-202ENST00000427478 JADE2Q9NQC1 790 aa24.09■■□□□ 1.45
CNEP1R1-202ENST00000427478 ADARB2Q9NS39 739 aaKnown RBP24.09■■□□□ 1.45
CNEP1R1-202ENST00000427478 CCDC175P0C221 793 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 MYCLP12524 364 aaPredicted RBP24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 TRIM21P19474 475 aaKnown RBP24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 MTMR1Q13613 665 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 TMTC1Q8IUR5 882 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 TSC1Q92574 1164 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 LXNQ9BS40 222 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 NDST4Q9H3R1 872 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms