RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 ACTR2P61160 394 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 NKX3-2P78367 333 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 HSDL1Q3SXM5 330 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 GJC2Q5T442 439 aaPredicted RBP17.35■□□□□ 0.37
COL11A1-204ENST00000427239 OR6J1Q8NGC5 347 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL11A1-204ENST00000427239 RNF208Q9H0X6 261 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 UNC93B1Q9H1C4 597 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 PAK6Q9NQU5 681 aaPredicted RBP17.35■□□□□ 0.37
COL11A1-204ENST00000427239 DISC1Q9NRI5 854 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 PCDHA7Q9UN72 937 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 SAMM50Q9Y512 469 aa17.35■□□□□ 0.37
COL11A1-204ENST00000427239 CCNE2O96020 404 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 BRCA2P51587 3418 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 LHX8Q68G74 356 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 ADALQ6DHV7 355 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 MIER3Q7Z3K6 550 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 GPR20Q99678 358 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 MCOLN1Q9GZU1 580 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 UPF3AQ9H1J1 476 aaKnown RBP17.34■□□□□ 0.37
COL11A1-204ENST00000427239 GDPD2Q9HCC8 539 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 XPNPEP3Q9NQH7 507 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 MYH15Q9Y2K3 1946 aa17.34■□□□□ 0.37
COL11A1-204ENST00000427239 CHMP2AO43633 222 aa17.33■□□□□ 0.37
COL11A1-204ENST00000427239 EPHA7Q15375 998 aa17.33■□□□□ 0.37
COL11A1-204ENST00000427239 NCAPH2Q6IBW4 605 aa17.33■□□□□ 0.37
COL11A1-204ENST00000427239 MIS18BP1Q6P0N0 1132 aa17.33■□□□□ 0.37
COL11A1-204ENST00000427239 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.37
COL11A1-204ENST00000427239 ERMNQ8TAM6 284 aa17.33■□□□□ 0.37
COL11A1-204ENST00000427239 AFG1LQ8WV93 481 aa17.33■□□□□ 0.37
COL11A1-204ENST00000427239 GSTTP1A0A1W2PQM5 241 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 POTEMA6NI47 508 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 SORBS3O60504 671 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 PSAPP07602 524 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 SP4Q02446 784 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 MTFR1Q15390 333 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 FSCN1Q16658 493 aaKnown RBP17.33■□□□□ 0.36
COL11A1-204ENST00000427239 DGKDQ16760 1214 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
COL11A1-204ENST00000427239 CLIC6Q96NY7 704 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 CSRNP2Q9H175 543 aa17.33■□□□□ 0.36
COL11A1-204ENST00000427239 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 GOLGA6L4A6NEF3 574 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 EML1O00423 815 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 KPNA6O60684 536 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 C6orf222P0C671 652 aaPredicted RBP17.32■□□□□ 0.36
COL11A1-204ENST00000427239 HOXD8P13378 290 aaPredicted RBP17.32■□□□□ 0.36
COL11A1-204ENST00000427239 TCF7P36402 384 aaPredicted RBP17.32■□□□□ 0.36
COL11A1-204ENST00000427239 UBA7P41226 1012 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 GNASQ5JWF2 1037 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 KRT79Q5XKE5 535 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 HAUS3Q68CZ6 603 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 RNF180Q86T96 592 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 TMEM87AQ8NBN3 555 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 ARRDC4Q8NCT1 418 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 NEK9Q8TD19 979 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 LENG1Q96BZ8 264 aaPredicted RBP17.32■□□□□ 0.36
COL11A1-204ENST00000427239 HSD17B14Q9BPX1 270 aa17.32■□□□□ 0.36
COL11A1-204ENST00000427239 IGKV6D-21A0A0A0MT36 114 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 SLC26A4O43511 780 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 ZEB2O60315 1214 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 ADAMTS4O75173 837 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 PGK1P00558 417 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
COL11A1-204ENST00000427239 SUPT20HL2P0C7V6 817 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 CAPN2P17655 700 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 GRIN1Q05586 938 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 AZI2Q9H6S1 392 aa17.31■□□□□ 0.36
COL11A1-204ENST00000427239 DKC1O60832 514 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL11A1-204ENST00000427239 GJB1P08034 283 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 MMP3P08254 477 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 MUTP22033 750 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 PTGS1P23219 599 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 CMA1P23946 247 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 RPA1P27694 616 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 CST5P28325 142 aaPredicted RBP17.3■□□□□ 0.36
COL11A1-204ENST00000427239 SWSAP1Q6NVH7 229 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 KCTD17Q8N5Z5 321 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
COL11A1-204ENST00000427239 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 EIF2AK1Q9BQI3 630 aaKnown RBP17.3■□□□□ 0.36
COL11A1-204ENST00000427239 POLR3CQ9BUI4 534 aaPredicted RBP17.3■□□□□ 0.36
COL11A1-204ENST00000427239 TCHHQ07283 1943 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 A0A1W2PQ27 194 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 A0A1W2PQ64 194 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 BACH1O14867 736 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 CTAGE5O15320 804 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 SLITRK3O94933 977 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 MYCP01106 439 aaPredicted RBP17.3■□□□□ 0.36
COL11A1-204ENST00000427239 CDC25AP30304 524 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 TXLNAP40222 546 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 QARSP47897 775 aaKnown RBP17.3■□□□□ 0.36
COL11A1-204ENST00000427239 SLC26A2P50443 739 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 STAT5BP51692 787 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 FAM160B1Q5W0V3 765 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 PLPPR4Q7Z2D5 763 aa17.3■□□□□ 0.36
COL11A1-204ENST00000427239 KLHDC9Q8NEP7 349 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms