RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 PBX2P40425 430 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 ARHGAP4P98171 946 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 SSRP1Q08945 709 aaKnown RBP12.28□□□□□ -0.44
LINC01238-202ENST00000426962 RAB30Q15771 203 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 ZNF618Q5T7W0 954 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 NIPA1Q7RTP0 329 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 TRIM22Q8IYM9 498 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 CCDC148Q8NFR7 591 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 PHOSPHO2Q8TCD6 241 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 BICD2Q8TD16 824 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 SDF4Q9BRK5 362 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
LINC01238-202ENST00000426962 SMARCAD1Q9H4L7 1026 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 ZNF576Q9H609 170 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 AGO4Q9HCK5 861 aaKnown RBP12.28□□□□□ -0.44
LINC01238-202ENST00000426962 JPH1Q9HDC5 661 aaPredicted RBP12.28□□□□□ -0.44
LINC01238-202ENST00000426962 SH3GLB2Q9NR46 395 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 SETD4Q9NVD3 440 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 ERAP1Q9NZ08 941 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 SLC9A2Q9UBY0 812 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 NFASCO94856 1347 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 NRCAMQ92823 1304 aa12.28□□□□□ -0.44
LINC01238-202ENST00000426962 BAIAP3O94812 1187 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 CXCL10P02778 98 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 THPOP40225 353 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 ADAM17P78536 824 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 CPLX2Q6PUV4 134 aaKnown RBP12.27□□□□□ -0.45
LINC01238-202ENST00000426962 TRIM50Q86XT4 487 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 REXO1Q8N1G1 1221 aaKnown RBP12.27□□□□□ -0.45
LINC01238-202ENST00000426962 CRYGNQ8WXF5 182 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 GLG1Q92896 1179 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 WNT8BQ93098 351 aa12.27□□□□□ -0.45
LINC01238-202ENST00000426962 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 FAM86B1E9PN63 330 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 NBNO60934 754 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 CAND2O75155 1236 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 LGR5O75473 907 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 ATG7O95352 703 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 DEXIO95424 95 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 FAM86B2P0C5J1 330 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 RABGGTBP53611 331 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 NLRP5P59047 1200 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 STK3Q13188 491 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 GRIN2CQ14957 1233 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 CNKSR3Q6P9H4 555 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 TRAF7Q6Q0C0 670 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 PLA2G4DQ86XP0 818 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 TNPO1Q92973 898 aaKnown RBP12.26□□□□□ -0.45
LINC01238-202ENST00000426962 SLC9A7Q96T83 725 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 AZI2Q9H6S1 392 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 SLC28A3Q9HAS3 691 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 VPS54Q9P1Q0 977 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 PCDHA11Q9Y5I1 949 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 COL6A3P12111 3177 aa12.26□□□□□ -0.45
LINC01238-202ENST00000426962 TRIP12Q14669 1992 aaPredicted RBP12.25□□□□□ -0.45
LINC01238-202ENST00000426962 ABHD14A-ACY1A0A1B0GW23 586 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 KIF28PB7ZC32 967 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 MARK3P27448 753 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 KCNJ6P48051 423 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 ACTR2P61160 394 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 ITGB3BPQ13352 177 aaPredicted RBP12.25□□□□□ -0.45
LINC01238-202ENST00000426962 IKBKEQ14164 716 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 PLPPR4Q7Z2D5 763 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 SLC17A8Q8NDX2 589 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 LMBR1Q8WVP7 490 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 MYLIPQ8WY64 445 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 IL17RAQ96F46 866 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 PCYT2Q99447 389 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 SLKQ9H2G2 1235 aaPredicted RBP12.25□□□□□ -0.45
LINC01238-202ENST00000426962 NKX2-4Q9H2Z4 354 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 YBX2Q9Y2T7 364 aaKnown RBP12.25□□□□□ -0.45
LINC01238-202ENST00000426962 EMSYQ7Z589 1322 aa12.25□□□□□ -0.45
LINC01238-202ENST00000426962 IGLV3-22A0A075B6J6 115 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 RRN3P2A6NIE6 340 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
LINC01238-202ENST00000426962 DHX15O43143 795 aaKnown RBP12.24□□□□□ -0.45
LINC01238-202ENST00000426962 EFCAB14O75071 495 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 CDKL5O76039 1030 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 CIITAP33076 1130 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 STAT5BP51692 787 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 USP11P51784 963 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 SETQ01105 290 aaPredicted RBP12.24□□□□□ -0.45
LINC01238-202ENST00000426962 SCRN1Q12765 414 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 PPFIA1Q13136 1202 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 MBTPS1Q14703 1052 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 GRIK4Q16099 956 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 RPAINQ86UA6 219 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
LINC01238-202ENST00000426962 RASGRP4Q8TDF6 673 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 ZNF577Q9BSK1 485 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 TBC1D22BQ9NU19 505 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
LINC01238-202ENST00000426962 SCN5AQ14524 2016 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 IGKV6D-21A0A0A0MT36 114 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 PFKFB2O60825 505 aa12.23□□□□□ -0.45
LINC01238-202ENST00000426962 INSRRP14616 1297 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms