RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 AGO4Q9HCK5 861 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 GSTTP1A0A1W2PQM5 241 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 GNAT1P11488 350 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 ACTN1P12814 892 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 SELPP16109 830 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 XBP1P17861 261 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 ZNF200P98182 395 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 RBL2Q08999 1139 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 RASIP1Q5U651 963 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 Q7L0L9 218 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 LRRC8DQ7L1W4 858 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 CRYGNQ8WXF5 182 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 AIFM3Q96NN9 605 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 SMARCAD1Q9H4L7 1026 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 AZI2Q9H6S1 392 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 ERAP1Q9NZ08 941 aa16.54■□□□□ 0.24
NCKIPSD-205ENST00000426678 EMSYQ7Z589 1322 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 ZBBXA8MT70 800 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 PARNO95453 639 aaKnown RBP16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 CKBP12277 381 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 MARK3P27448 753 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 HOXC8P31273 242 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 ACTR2P61160 394 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 FAM109BQ6ICB4 259 aaPredicted RBP16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 SERINC5Q86VE9 423 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 BLIDQ8IZY5 108 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 RNPEPQ9H4A4 650 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 TCEAL9Q9UHQ7 104 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 KAT6AQ92794 2004 aa16.53■□□□□ 0.24
NCKIPSD-205ENST00000426678 NRCAMQ92823 1304 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 IGLV3-22A0A075B6J6 115 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 DDX39AO00148 427 aaKnown RBP16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 HIC1Q14526 733 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 ME3Q16798 604 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 PRR16Q569H4 304 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 DAGLBQ8NCG7 672 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 WASF1Q92558 559 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 GTF3C6Q969F1 213 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 ZNF577Q9BSK1 485 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 SETD4Q9NVD3 440 aa16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 CXXC1Q9P0U4 656 aaPredicted RBP16.52■□□□□ 0.24
NCKIPSD-205ENST00000426678 TREHO43280 583 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 LGR5O75473 907 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 DNAJB2P25686 324 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 CIITAP33076 1130 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 THPOP40225 353 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 PPFIA1Q13136 1202 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 TRIM71Q2Q1W2 868 aaKnown RBP16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 ZNF618Q5T7W0 954 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 TBCKQ8TEA7 893 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 LMBR1Q8WVP7 490 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 TNPO1Q92973 898 aaKnown RBP16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 WNT8BQ93098 351 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 ORC3Q9UBD5 711 aaPredicted RBP16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 KCNJ14Q9UNX9 436 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 SLC4A7Q9Y6M7 1214 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 SZT2Q5T011 3432 aa16.51■□□□□ 0.23
NCKIPSD-205ENST00000426678 LARGE1O95461 756 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 USP11P51784 963 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 GRIK4Q16099 956 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 KRT25Q7Z3Z0 450 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 FAM161BQ96MY7 647 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 UIMC1Q96RL1 719 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 PCYT2Q99447 389 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 TBC1D22BQ9NU19 505 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 MTMR10Q9NXD2 777 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 TRPC6Q9Y210 931 aa16.5■□□□□ 0.23
NCKIPSD-205ENST00000426678 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 GRXCR1A8MXD5 290 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 RSPH10B2B2RC85 870 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 BACH1O14867 736 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 CAND2O75155 1236 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 CCNE2O96020 404 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 RSPH10BP0C881 870 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 STAT5BP51692 787 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 NONOQ15233 471 aaKnown RBP eCLIP16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 RAB30Q15771 203 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 FAM160B1Q5W0V3 765 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 MIS18BP1Q6P0N0 1132 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 PHF20Q9BVI0 1012 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 PBX4Q9BYU1 374 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 MSRAQ9UJ68 235 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 TUBE1Q9UJT0 475 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-205ENST00000426678 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
NCKIPSD-205ENST00000426678 DHX15O43143 795 aaKnown RBP16.48■□□□□ 0.23
NCKIPSD-205ENST00000426678 NBNO60934 754 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms