RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TRIM9Q9C026 710 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 CPA4Q9UI42 421 aa16.9■□□□□ 0.3
GINS3-203ENST00000426538 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.29
GINS3-203ENST00000426538 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
GINS3-203ENST00000426538 SSBP05455 408 aaKnown RBP eCLIP16.89■□□□□ 0.29
GINS3-203ENST00000426538 MAPK4P31152 587 aa16.89■□□□□ 0.29
GINS3-203ENST00000426538 SEMA3FQ13275 785 aa16.89■□□□□ 0.29
GINS3-203ENST00000426538 CTTNQ14247 550 aaKnown RBP16.89■□□□□ 0.29
GINS3-203ENST00000426538 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.29
GINS3-203ENST00000426538 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
GINS3-203ENST00000426538 LUZP1Q86V48 1076 aa16.89■□□□□ 0.29
GINS3-203ENST00000426538 ZFYVE28Q9HCC9 887 aa16.89■□□□□ 0.29
GINS3-203ENST00000426538 P4HBP07237 508 aaKnown RBP16.88■□□□□ 0.29
GINS3-203ENST00000426538 PLA2G4BP0C869 781 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 ADORA2AP29274 412 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 SFNP31947 248 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 ICAM3P32942 547 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 JAK3P52333 1124 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 ASIC1P78348 528 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 LCTP09848 1927 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 NFASCO94856 1347 aa16.88■□□□□ 0.29
GINS3-203ENST00000426538 ASB14A6NK59 587 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 WDR64B1ANS9 1081 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 TLR2O60603 784 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 TGFB3P10600 412 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 BMP6P22004 513 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 YY1P25490 414 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 TM4SF4P48230 202 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 KCNB1Q14721 858 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 ZNF746Q6NUN9 644 aaPredicted RBP16.87■□□□□ 0.29
GINS3-203ENST00000426538 PLEKHH3Q7Z736 793 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 DPP9Q86TI2 863 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 ZNFX1Q9P2E3 1918 aaKnown RBP16.87■□□□□ 0.29
GINS3-203ENST00000426538 MYMKA6NI61 221 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 SMTNL1A8MU46 457 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 KCNA2P16389 499 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 PSMC6P62333 389 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 IQCB1Q15051 598 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 CYP4F22Q6NT55 531 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 DYMQ7RTS9 669 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 GIMAP8Q8ND71 665 aaPredicted RBP16.87■□□□□ 0.29
GINS3-203ENST00000426538 RDM1Q8NG50 284 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 DDX12PQ92771 950 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 NACC1Q96RE7 527 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 SENP7Q9BQF6 1050 aa16.87■□□□□ 0.29
GINS3-203ENST00000426538 GTPBP4Q9BZE4 634 aaKnown RBP16.87■□□□□ 0.29
GINS3-203ENST00000426538 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 CT47A1Q5JQC4 288 aaPredicted RBP16.86■□□□□ 0.29
GINS3-203ENST00000426538 ZNF658Q5TYW1 1059 aaPredicted RBP16.86■□□□□ 0.29
GINS3-203ENST00000426538 KCNV1Q6PIU1 500 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 EEPD1Q7L9B9 569 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 SMAP1Q8IYB5 467 aaPredicted RBP16.86■□□□□ 0.29
GINS3-203ENST00000426538 SYT2Q8N9I0 419 aaPredicted RBP16.86■□□□□ 0.29
GINS3-203ENST00000426538 BANK1Q8NDB2 785 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 LXNQ9BS40 222 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 JPH1Q9HDC5 661 aaPredicted RBP16.86■□□□□ 0.29
GINS3-203ENST00000426538 EXOC1Q9NV70 894 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 SLC9A2Q9UBY0 812 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 KIAA1217Q5T5P2 1943 aa16.86■□□□□ 0.29
GINS3-203ENST00000426538 PVALEFA0A1B0GWK0 134 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 KLRC4O43908 158 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 RHOBTB3O94955 611 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 EYA4O95677 639 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 KRT18P05783 430 aaKnown RBP16.85■□□□□ 0.29
GINS3-203ENST00000426538 QARSP47897 775 aaKnown RBP16.85■□□□□ 0.29
GINS3-203ENST00000426538 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 ZNF792Q3KQV3 632 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 GPBP1Q86WP2 473 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 AOPEPQ8N6M6 819 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
GINS3-203ENST00000426538 PIGOQ8TEQ8 1089 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 FGD4Q96M96 766 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 BHMT2Q9H2M3 363 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 PCDHA10Q9Y5I2 948 aa16.85■□□□□ 0.29
GINS3-203ENST00000426538 COBLO75128 1261 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 IDEP14735 1019 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 SLC12A3P55017 1021 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 TPM4P67936 248 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 NOGQ13253 232 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 GRB14Q14449 540 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 NEDD9Q14511 834 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 C17orf99Q6UX52 265 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 UNC13DQ70J99 1090 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 CYFIP1Q7L576 1253 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 DHX40Q8IX18 779 aaKnown RBP16.84■□□□□ 0.29
GINS3-203ENST00000426538 MORC4Q8TE76 937 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 ADGRA2Q96PE1 1338 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 DKC1O60832 514 aaKnown RBP eCLIP16.84■□□□□ 0.29
GINS3-203ENST00000426538 CCNE2O96020 404 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 ALDH1A1P00352 501 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 SP2Q02086 613 aa16.84■□□□□ 0.29
GINS3-203ENST00000426538 ZNF467Q7Z7K2 595 aaPredicted RBP16.84■□□□□ 0.29
GINS3-203ENST00000426538 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms