RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 NSUN6Q8TEA1 469 aaKnown RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 CCDC12Q8WUD4 166 aaPredicted RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 SPIRE2Q8WWL2 714 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 CRYGNQ8WXF5 182 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 LENG1Q96BZ8 264 aaPredicted RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 UIMC1Q96RL1 719 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 BCAS3Q9H6U6 928 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 MAP3K20Q9NYL2 800 aaKnown RBP6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 MGAMO43451 1857 aa6.53□□□□□ -1.36
HERPUD2-204ENST00000426180 SYNGAP1Q96PV0 1343 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 VPS37CA5D8V6 355 aaPredicted RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 ASB14A6NK59 587 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 SPDYE3A6NKU9 549 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 H3BM21 787 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 ARIH2O95376 493 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 HMGCRP04035 888 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 CYBAP13498 195 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 XBP1P17861 261 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 ITGB5P18084 799 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 NDUFV2P19404 249 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 KRT2P35908 639 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 ARHGAP4P98171 946 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 PDE4DQ08499 809 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 SEMA3FQ13275 785 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 AP3B2Q13367 1082 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 ACVR2BQ13705 512 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 PKP1Q13835 747 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 TRIM29Q14134 588 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 INF2Q27J81 1249 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 GJC2Q5T442 439 aaPredicted RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 MAP3K21Q5TCX8 1036 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 FOXD4L5Q5VV16 416 aaPredicted RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 MFSD14CQ5VZR4 134 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 GALNT17Q6IS24 598 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 TAPT1Q6NXT6 567 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 PIK3AP1Q6ZUJ8 805 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 FAM177A1Q8N128 213 aaPredicted RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 PRR7Q8TB68 274 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 BICD2Q8TD16 824 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 TBCKQ8TEA7 893 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 FOXD4L4Q8WXT5 416 aaPredicted RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 MAF1Q9H063 256 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 GLT8D2Q9H1C3 349 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 SLC5A4Q9NY91 659 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 RTEL1Q9NZ71 1219 aa6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 ADD3Q9UEY8 706 aaKnown RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 ZHX1Q9UKY1 873 aaPredicted RBP6.52□□□□□ -1.37
HERPUD2-204ENST00000426180 HTTP42858 3142 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 CCDC194A0A1B0GVG4 234 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 FAM86B1E9PN63 330 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 H3BQV1 296 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 SORBS3O60504 671 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 EIF3JO75822 258 aaKnown RBP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 TDP2O95551 362 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 FOSP01100 380 aaPredicted RBP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 HSP90AA1P07900 732 aaKnown RBP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 CYP3A4P08684 503 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 FAM86B2P0C5J1 330 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 ARP10275 920 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 CCL5P13501 91 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 U2AF2P26368 475 aaKnown RBP eCLIP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 CCND2P30279 289 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 DDIT3P35638 169 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 SREBF1P36956 1147 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 ADCYAP1R1P41586 468 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 SP2Q02086 613 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 BECN1Q14457 450 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 NONOQ15233 471 aaKnown RBP eCLIP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 STXBP2Q15833 593 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 PKN2Q16513 984 aaKnown RBP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 LY6KQ17RY6 165 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 SLC9C1Q4G0N8 1177 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 ANO1Q5XXA6 986 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 PCNX4Q63HM2 1172 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 SEPT14Q6ZU15 432 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 KRT25Q7Z3Z0 450 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 FERMT3Q86UX7 667 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 TRMT44Q8IYL2 757 aaKnown RBP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 MSL3Q8N5Y2 521 aaKnown RBP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 ZNF511Q8NB15 262 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 COPS5Q92905 334 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 LENG9Q96B70 501 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 ARMC5Q96C12 935 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 ZNF333Q96JL9 665 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 IWS1Q96ST2 819 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 WDR11Q9BZH6 1224 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 MTMR6Q9Y217 621 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 ZDHHC9Q9Y397 364 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 TELO2Q9Y4R8 837 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 UBIAD1Q9Y5Z9 338 aa6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 RBBP6Q7Z6E9 1792 aaKnown RBP6.51□□□□□ -1.37
HERPUD2-204ENST00000426180 LRRC37A2A6NM11 1700 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 DOCK3Q8IZD9 2030 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 IGLV3-22A0A075B6J6 115 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 LOC102724159A0A0B4J2E5 919 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 RBM47A0AV96 593 aaKnown RBP6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 MOXD2PA6NHM9 499 aa6.5□□□□□ -1.37
HERPUD2-204ENST00000426180 MEIS1O00470 390 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms