RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CACNA2D4Q7Z3S7 1137 aa14.32□□□□□ -0.12
COL12A1-205ENST00000425443 PODNQ7Z5L7 613 aa14.32□□□□□ -0.12
COL12A1-205ENST00000425443 PROM2Q8N271 834 aa14.32□□□□□ -0.12
COL12A1-205ENST00000425443 ERGIC2Q96RQ1 377 aa14.32□□□□□ -0.12
COL12A1-205ENST00000425443 SNX12Q9UMY4 172 aa14.32□□□□□ -0.12
COL12A1-205ENST00000425443 TARSL2A2RTX5 802 aaKnown RBP14.31□□□□□ -0.12
COL12A1-205ENST00000425443 H0YHG0 523 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
COL12A1-205ENST00000425443 APBA3O96018 575 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 EIF4A3P38919 411 aaKnown RBP14.31□□□□□ -0.12
COL12A1-205ENST00000425443 SARNPP82979 210 aaKnown RBP14.31□□□□□ -0.12
COL12A1-205ENST00000425443 QRICH1Q2TAL8 776 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 CCDC170Q8IYT3 715 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 NDST4Q9H3R1 872 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 SH2D4AQ9H788 454 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 PI4KBQ9UBF8 816 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 PCDHA13Q9Y5I0 950 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 PCDHAC2Q9Y5I4 1007 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 USH1GQ495M9 461 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 CCDC40Q4G0X9 1142 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 CENPPQ6IPU0 288 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 CCDC91Q7Z6B0 441 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 AFAP1L1Q8TED9 768 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 AENQ8WTP8 325 aaKnown RBP14.31□□□□□ -0.12
COL12A1-205ENST00000425443 DHX36Q9H2U1 1008 aaKnown RBP14.31□□□□□ -0.12
COL12A1-205ENST00000425443 KIAA1024Q9UPX6 916 aa14.31□□□□□ -0.12
COL12A1-205ENST00000425443 LRRC53A6NM62 1247 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 TRAF5O00463 557 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 CAND2O75155 1236 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 GDF11O95390 407 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 GCFC2P16383 781 aaKnown RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 KIF11P52732 1056 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 SNAP25P60880 206 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 ICA1Q05084 483 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 CDC37Q16543 378 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 VWA3BQ502W6 1294 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 MYOCDQ8IZQ8 938 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 EHBP1Q8NDI1 1231 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 NT5C3AQ9H0P0 336 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 PANK4Q9NVE7 773 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 CWC15Q9P013 229 aaKnown RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 PLAGL2Q9UPG8 496 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 MYO3BQ8WXR4 1341 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 NPHP3-ACAD11A0A0J9YXS1 232 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 PPP1R12AO14974 1030 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 SEPT2Q15019 361 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 ECM1Q16610 540 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 MS4A14Q96JA4 679 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 NAP1L4Q99733 375 aaKnown RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 GLT8D2Q9H1C3 349 aa14.3□□□□□ -0.12
COL12A1-205ENST00000425443 DDTLA6NHG4 134 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 SHROOM1Q2M3G4 852 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 CCDC84Q86UT8 332 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 TSEN2Q8NCE0 465 aaKnown RBP14.3□□□□□ -0.12
COL12A1-205ENST00000425443 A0A1W2PQJ5 194 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 ANO9A1A5B4 782 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 E9PMD0 336 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 TUBBP07437 444 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 LRRC63Q05C16 580 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 MAN2A1Q16706 1144 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 HERC4Q5GLZ8 1057 aaPredicted RBP14.29□□□□□ -0.12
COL12A1-205ENST00000425443 BAP1Q92560 729 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 HAS1Q92839 578 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 MTMR8Q96EF0 704 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 FGFBP2Q9BYJ0 223 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 KDM3AQ9Y4C1 1321 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 H0YIN7 160 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 TAL1P17542 331 aaPredicted RBP14.29□□□□□ -0.12
COL12A1-205ENST00000425443 RASSF7Q02833 373 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 CKAP4Q07065 602 aaKnown RBP14.29□□□□□ -0.12
COL12A1-205ENST00000425443 PSMD2Q13200 908 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 FAM26FQ5R3K3 315 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 DNAAF5Q86Y56 855 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 CCDC65Q8IXS2 484 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 GOLGA6L1Q8N7Z2 621 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 SPATA4Q8NEY3 305 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 ZDHHC15Q96MV8 337 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 ANO3Q9BYT9 981 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 IRAK4Q9NWZ3 460 aa14.29□□□□□ -0.12
COL12A1-205ENST00000425443 USO1O60763 962 aaKnown RBP14.28□□□□□ -0.12
COL12A1-205ENST00000425443 EPS15P42566 896 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 COASYQ13057 564 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 ZKSCAN8Q15776 578 aaPredicted RBP14.28□□□□□ -0.12
COL12A1-205ENST00000425443 PRR16Q569H4 304 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 ZC3H12AQ5D1E8 599 aaKnown RBP14.28□□□□□ -0.12
COL12A1-205ENST00000425443 CCDC181Q5TID7 509 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 SND1Q7KZF4 910 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL12A1-205ENST00000425443 OSBPL9Q96SU4 736 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL12A1-205ENST00000425443 SPDYE3A6NKU9 549 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 ECE2O60344 883 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 HNRNPH3P31942 346 aaKnown RBP14.28□□□□□ -0.12
COL12A1-205ENST00000425443 CDK17Q00537 523 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 ABCB5Q2M3G0 1257 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 FIGNQ5HY92 759 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 GPBP1Q86WP2 473 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 POTEB3A0JP26 581 aa14.28□□□□□ -0.12
COL12A1-205ENST00000425443 ZSCAN5CA6NGD5 496 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms