RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 KNG1P01042 644 aa7.86□□□□□ -1.15
LINC01040-201ENST00000425048 SLPIP03973 132 aa7.86□□□□□ -1.15
LINC01040-201ENST00000425048 SPIRE1Q08AE8 756 aa7.86□□□□□ -1.15
LINC01040-201ENST00000425048 TUSC3Q13454 348 aa7.86□□□□□ -1.15
LINC01040-201ENST00000425048 R3HDM1Q15032 1099 aaKnown RBP7.86□□□□□ -1.15
LINC01040-201ENST00000425048 PAN2Q504Q3 1202 aaKnown RBP7.86□□□□□ -1.15
LINC01040-201ENST00000425048 HS1BP3Q53T59 392 aa7.86□□□□□ -1.15
LINC01040-201ENST00000425048 RBM12BQ8IXT5 1001 aaKnown RBP7.86□□□□□ -1.15
LINC01040-201ENST00000425048 AJUBAQ96IF1 538 aa7.86□□□□□ -1.15
LINC01040-201ENST00000425048 MEGF9Q9H1U4 602 aa7.86□□□□□ -1.15
LINC01040-201ENST00000425048 PPARGC1AQ9UBK2 798 aaKnown RBP7.86□□□□□ -1.15
LINC01040-201ENST00000425048 R3HCC1Q9Y3T6 440 aaKnown RBP7.86□□□□□ -1.15
LINC01040-201ENST00000425048 ERCC5P28715 1186 aaPredicted RBP7.85□□□□□ -1.15
LINC01040-201ENST00000425048 HSP90AA2PQ14568 343 aaPredicted RBP7.85□□□□□ -1.15
LINC01040-201ENST00000425048 SKIDA1Q1XH10 827 aa7.85□□□□□ -1.15
LINC01040-201ENST00000425048 DCAF4Q8WV16 495 aa7.85□□□□□ -1.15
LINC01040-201ENST00000425048 ARHGAP20Q9P2F6 1191 aa7.85□□□□□ -1.15
LINC01040-201ENST00000425048 CNOT4O95628 575 aaKnown RBP7.84□□□□□ -1.15
LINC01040-201ENST00000425048 COL6A2P12110 1019 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 GLRBP48167 497 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 PFKPQ01813 784 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 LBX2Q6XYB7 198 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 UHMK1Q8TAS1 419 aaKnown RBP7.84□□□□□ -1.15
LINC01040-201ENST00000425048 SGSM3Q96HU1 749 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 ZFP69BQ9UJL9 534 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 SLC4A7Q9Y6M7 1214 aa7.84□□□□□ -1.15
LINC01040-201ENST00000425048 GNAT1P11488 350 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 KIZQ2M2Z5 673 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 SPDYAQ5MJ70 313 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 IFNL2Q8IZJ0 200 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 STPG3Q8N7X2 389 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 LMF1Q96S06 567 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 KCNJ15Q99712 375 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 KCND1Q9NSA2 647 aa7.83□□□□□ -1.16
LINC01040-201ENST00000425048 LTFP02788 710 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 GRK2P25098 689 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 CSF2RBP32927 897 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 GRK3P35626 688 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.82□□□□□ -1.16
LINC01040-201ENST00000425048 GNRHR2Q96P88 292 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 ZFYVE21Q9BQ24 234 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 ST7Q9NRC1 585 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 DSEQ9UL01 958 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 HS3ST3A1Q9Y663 406 aa7.82□□□□□ -1.16
LINC01040-201ENST00000425048 H0Y858 1186 aa7.81□□□□□ -1.16
LINC01040-201ENST00000425048 ARID5AQ03989 594 aa7.81□□□□□ -1.16
LINC01040-201ENST00000425048 CD276Q5ZPR3 534 aa7.81□□□□□ -1.16
LINC01040-201ENST00000425048 TCTN3Q6NUS6 607 aa7.81□□□□□ -1.16
LINC01040-201ENST00000425048 KCNT2Q6UVM3 1135 aa7.81□□□□□ -1.16
LINC01040-201ENST00000425048 REXO1L1PQ8IX06 675 aa7.81□□□□□ -1.16
LINC01040-201ENST00000425048 GIMAP8Q8ND71 665 aaPredicted RBP7.81□□□□□ -1.16
LINC01040-201ENST00000425048 AARSD1Q9BTE6 412 aaKnown RBP7.81□□□□□ -1.16
LINC01040-201ENST00000425048 KATNBL1Q9H079 304 aa7.81□□□□□ -1.16
LINC01040-201ENST00000425048 IQCA1LA6NCM1 817 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 NKRFO15226 690 aaKnown RBP eCLIP7.8□□□□□ -1.16
LINC01040-201ENST00000425048 PRODHO43272 600 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 FOXS1O43638 330 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 EPHA5P54756 1037 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 PRKD1Q15139 912 aaPredicted RBP7.8□□□□□ -1.16
LINC01040-201ENST00000425048 HABP4Q5JVS0 413 aaKnown RBP7.8□□□□□ -1.16
LINC01040-201ENST00000425048 IFNL3Q8IZI9 196 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 LRRC37BQ96QE4 947 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 PCED1AQ9H1Q7 454 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 SLITRK6Q9H5Y7 841 aa7.8□□□□□ -1.16
LINC01040-201ENST00000425048 ZNF839A8K0R7 811 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 IL18BPO95998 194 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 FGRP09769 529 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 FGFR1P11362 822 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 GPR85P60893 370 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 USP10Q14694 798 aaKnown RBP7.79□□□□□ -1.16
LINC01040-201ENST00000425048 NSMFQ6X4W1 530 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 KCTD1Q719H9 257 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 GPR155Q7Z3F1 870 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 TAX1BP1Q86VP1 789 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 MENTQ9BUN1 341 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 CARD11Q9BXL7 1154 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 ZNF341Q9BYN7 854 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 ZFR2Q9UPR6 939 aaKnown RBP7.79□□□□□ -1.16
LINC01040-201ENST00000425048 TELO2Q9Y4R8 837 aa7.79□□□□□ -1.16
LINC01040-201ENST00000425048 FAM47E-STBD1D6RA91 191 aa7.78□□□□□ -1.16
LINC01040-201ENST00000425048 OVOL3O00110 214 aa7.78□□□□□ -1.16
LINC01040-201ENST00000425048 SOD2P04179 222 aa7.78□□□□□ -1.16
LINC01040-201ENST00000425048 ZNF568Q3ZCX4 644 aa7.78□□□□□ -1.16
LINC01040-201ENST00000425048 CELF2-AS1Q8N7Q2 184 aa7.78□□□□□ -1.16
LINC01040-201ENST00000425048 TACO1Q9BSH4 297 aaKnown RBP7.78□□□□□ -1.16
LINC01040-201ENST00000425048 PABPC1P11940 636 aaKnown RBP7.77□□□□□ -1.17
LINC01040-201ENST00000425048 NTRK3Q16288 839 aa7.77□□□□□ -1.17
LINC01040-201ENST00000425048 DDR2Q16832 855 aa7.77□□□□□ -1.17
LINC01040-201ENST00000425048 STYK1Q6J9G0 422 aa7.77□□□□□ -1.17
LINC01040-201ENST00000425048 DPP8Q6V1X1 898 aaPredicted RBP7.77□□□□□ -1.17
LINC01040-201ENST00000425048 DPH6Q7L8W6 267 aa7.77□□□□□ -1.17
LINC01040-201ENST00000425048 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC01040-201ENST00000425048 HNRNPLLQ8WVV9 542 aaKnown RBP7.77□□□□□ -1.17
LINC01040-201ENST00000425048 OSBP2Q969R2 916 aa7.77□□□□□ -1.17
LINC01040-201ENST00000425048 NEIL1Q96FI4 390 aaPredicted RBP7.77□□□□□ -1.17
LINC01040-201ENST00000425048 ADOQ96SZ5 270 aa7.77□□□□□ -1.17
LINC01040-201ENST00000425048 ACOT7O00154 380 aa7.76□□□□□ -1.17
LINC01040-201ENST00000425048 POLD1P28340 1107 aa7.76□□□□□ -1.17
LINC01040-201ENST00000425048 RAC3P60763 192 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms