RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 REC8O95072 547 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 CHRNA1P02708 482 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 FGD1P98174 961 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 FUT2Q10981 343 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 UBE2SQ16763 222 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 MARCH8Q5T0T0 291 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 RUFY4Q6ZNE9 571 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 TMTC2Q8N394 836 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 CTCFLQ8NI51 663 aaPredicted RBP14.91□□□□□ -0.02
VRK3-203ENST00000424804 SMARCC2Q8TAQ2 1214 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 LMBR1Q8WVP7 490 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 TOP1MTQ969P6 601 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 TMEM87BQ96K49 555 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 RAPGEFL1Q9UHV5 662 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 MTUS1Q9ULD2 1270 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 NAP1L2Q9ULW6 460 aaPredicted RBP14.91□□□□□ -0.02
VRK3-203ENST00000424804 ATG2AQ2TAZ0 1938 aa14.91□□□□□ -0.02
VRK3-203ENST00000424804 NOP56O00567 594 aaKnown RBP14.9□□□□□ -0.02
VRK3-203ENST00000424804 CAND2O75155 1236 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 LINC00271P0C7V0 271 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 KIF5BP33176 963 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 MGAT3Q09327 533 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 KRT32Q14532 448 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 SKIV2LQ15477 1246 aaKnown RBP14.9□□□□□ -0.02
VRK3-203ENST00000424804 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 UTP14CQ5TAP6 766 aaKnown RBP14.9□□□□□ -0.02
VRK3-203ENST00000424804 TYW1BQ6NUM6 668 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 TMTC3Q6ZXV5 915 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 RPAINQ86UA6 219 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.02
VRK3-203ENST00000424804 HLA-CQ95604 372 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 GPRASP2Q96D09 838 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 PCYT2Q99447 389 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 PSTPIP2Q9H939 334 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 INSL6Q9Y581 213 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 COL4A6Q14031 1691 aa14.9□□□□□ -0.02
VRK3-203ENST00000424804 NLRC5Q86WI3 1866 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 CTSHP09668 335 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 CPA1P15085 419 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 COL9A1P20849 921 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 GNAQP50148 359 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 EXOSC10Q01780 885 aaKnown RBP14.89□□□□□ -0.03
VRK3-203ENST00000424804 AAK1Q2M2I8 961 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 SYNE3Q6ZMZ3 975 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 MYOCDQ8IZQ8 938 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 FANCBQ8NB91 859 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 JAKMIP1Q96N16 626 aaKnown RBP14.89□□□□□ -0.03
VRK3-203ENST00000424804 CD320Q9NPF0 282 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 PCDHA6Q9UN73 950 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 PCDHA8Q9Y5H6 950 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
VRK3-203ENST00000424804 TTC3P53804 2025 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 MBLAC1A4D2B0 266 aaPredicted RBP14.88□□□□□ -0.03
VRK3-203ENST00000424804 AMHP03971 560 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 TCF7P36402 384 aaPredicted RBP14.88□□□□□ -0.03
VRK3-203ENST00000424804 ARHGAP4P98171 946 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 SP4Q02446 784 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 NLRX1Q86UT6 975 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 MICU3Q86XE3 530 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 CCDC82Q8N4S0 544 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 CYP2W1Q8TAV3 490 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 SEPT8Q92599 483 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 CUL5Q93034 780 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 JADE2Q9NQC1 790 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 FAM217BQ9NTX9 383 aaPredicted RBP14.88□□□□□ -0.03
VRK3-203ENST00000424804 BRPF3Q9ULD4 1205 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 NRCAMQ92823 1304 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 LOXHD1Q8IVV2 1947 aa14.88□□□□□ -0.03
VRK3-203ENST00000424804 CALM1P0DP23 149 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 CALM2P0DP24 149 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 CALM3P0DP25 149 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 GNAT1P11488 350 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 HSPA4P34932 840 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 EPC2Q52LR7 807 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 DHX32Q7L7V1 743 aaKnown RBP14.87□□□□□ -0.03
VRK3-203ENST00000424804 CRIPAKQ8N1N5 446 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 GIMAP8Q8ND71 665 aaPredicted RBP14.87□□□□□ -0.03
VRK3-203ENST00000424804 SEPT1Q8WYJ6 367 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 ZBTB10Q96DT7 871 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 EPHX3Q9H6B9 360 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 RC3H2Q9HBD1 1191 aaKnown RBP14.87□□□□□ -0.03
VRK3-203ENST00000424804 SEC63Q9UGP8 760 aaKnown RBP14.87□□□□□ -0.03
VRK3-203ENST00000424804 SNX14Q9Y5W7 946 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 CNTNAP5Q8WYK1 1306 aa14.87□□□□□ -0.03
VRK3-203ENST00000424804 H3BNC9 293 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 ADAMTS3O15072 1205 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 LPIN1Q14693 890 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 TSGA10IPQ3SY00 556 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 WWC2Q6AWC2 1192 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 APOA5Q6Q788 366 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 BLOC1S2Q6QNY1 142 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 RTN4RL1Q86UN2 441 aaPredicted RBP14.86□□□□□ -0.03
VRK3-203ENST00000424804 FBXO22Q8NEZ5 403 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.86□□□□□ -0.03
VRK3-203ENST00000424804 UBE2ZQ9H832 354 aaPredicted RBP14.86□□□□□ -0.03
VRK3-203ENST00000424804 ZNF215Q9UL58 517 aaPredicted RBP14.86□□□□□ -0.03
VRK3-203ENST00000424804 RALGAPA2Q2PPJ7 1873 aa14.86□□□□□ -0.03
VRK3-203ENST00000424804 KLF18A0A0U1RQI7 1052 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms