RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ALS2CLQ60I27 953 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 IQCKQ8N0W5 287 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 KRT12Q99456 494 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 MYMKA6NI61 221 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 ZFPM1Q8IX07 1006 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 CASKIN2Q8WXE0 1202 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 PRMT6Q96LA8 375 aaPredicted RBP15.8■□□□□ 0.12
MSH5-206ENST00000423982 C7orf25Q9BPX7 421 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 TANGO6Q9C0B7 1094 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 GOLPH3Q9H4A6 298 aa15.8■□□□□ 0.12
MSH5-206ENST00000423982 PALMO75781 387 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 LCA5LO95447 670 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 PPP4CP60510 307 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 NAA35Q5VZE5 725 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 HGSNATQ68CP4 663 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 CENPPQ6IPU0 288 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 CENPHQ9H3R5 247 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 MYL1P05976 194 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 TXKP42681 527 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 FNTAP49354 379 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 ASTE1Q2TB18 679 aaPredicted RBP15.79■□□□□ 0.12
MSH5-206ENST00000423982 CIAPIN1Q6FI81 312 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 CACNA2D4Q7Z3S7 1137 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 OGFOD1Q8N543 542 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 NCAPGQ9BPX3 1015 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 PACSIN1Q9BY11 444 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 STX8Q9UNK0 236 aa15.79■□□□□ 0.12
MSH5-206ENST00000423982 FAM196BA6NMK8 535 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 TLR2O60603 784 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 EGFRP00533 1210 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 HPDP32754 393 aaPredicted RBP15.78■□□□□ 0.12
MSH5-206ENST00000423982 HDLBPQ00341 1268 aaKnown RBP15.78■□□□□ 0.12
MSH5-206ENST00000423982 KCNMA1Q12791 1236 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 OTUD6BQ8N6M0 293 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 OR2W6PQ8NHA6 318 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 UIMC1Q96RL1 719 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 VAT1LQ9HCJ6 419 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 GDF3Q9NR23 364 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 BARHL2Q9NY43 387 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 SUGT1Q9Y2Z0 365 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 H0YHG0 523 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 BACH1O14867 736 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 PCP11498 1178 aaKnown RBP15.78■□□□□ 0.12
MSH5-206ENST00000423982 TMED8Q6PL24 325 aaPredicted RBP15.78■□□□□ 0.12
MSH5-206ENST00000423982 KLHL7Q8IXQ5 586 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 CCDC47Q96A33 483 aaKnown RBP15.78■□□□□ 0.12
MSH5-206ENST00000423982 FAM163AQ96GL9 167 aaPredicted RBP15.78■□□□□ 0.12
MSH5-206ENST00000423982 NOX5Q96PH1 765 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 NUDT12Q9BQG2 462 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 SH3GLB2Q9NR46 395 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 BLOC1S4Q9NUP1 217 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 GEMIN8Q9NWZ8 242 aaKnown RBP15.78■□□□□ 0.12
MSH5-206ENST00000423982 TMEM260Q9NX78 707 aa15.78■□□□□ 0.12
MSH5-206ENST00000423982 VIL1P09327 827 aaKnown RBP15.77■□□□□ 0.12
MSH5-206ENST00000423982 NR1D1P20393 614 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 KLRC1P26715 233 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 EHHADHQ08426 723 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 MAN2A1Q16706 1144 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 CFAP221Q4G0U5 840 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 PDXDC1Q6P996 788 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 IFT20Q8IY31 132 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 CNPY4Q8N129 248 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 VEZTQ9HBM0 779 aa15.77■□□□□ 0.12
MSH5-206ENST00000423982 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.12
MSH5-206ENST00000423982 FER1L6Q2WGJ9 1857 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 TCP10L2B9ZVM9 353 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 MEFVO15553 781 aaPredicted RBP15.77■□□□□ 0.11
MSH5-206ENST00000423982 PLCG2P16885 1265 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 NAPAP54920 295 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 GRB10Q13322 594 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 GRM4Q14833 912 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 RNF187Q5TA31 235 aaPredicted RBP15.77■□□□□ 0.11
MSH5-206ENST00000423982 CNNM4Q6P4Q7 775 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 ZNF473Q8WTR7 871 aaKnown RBP15.77■□□□□ 0.11
MSH5-206ENST00000423982 GJA10Q969M2 543 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 BIN2Q9UBW5 565 aaPredicted RBP15.77■□□□□ 0.11
MSH5-206ENST00000423982 ZNF541Q9H0D2 1346 aa15.77■□□□□ 0.11
MSH5-206ENST00000423982 PJA2O43164 708 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 IBSPP21815 317 aaPredicted RBP15.76■□□□□ 0.11
MSH5-206ENST00000423982 C12orf60Q5U649 245 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 HHIPL2Q6UWX4 724 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 MAATS1Q7Z4T9 603 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 DDX42Q86XP3 938 aaKnown RBP eCLIP15.76■□□□□ 0.112e-6■□□□□ 8.3
MSH5-206ENST00000423982 PRPF38AQ8NAV1 312 aaKnown RBP15.76■□□□□ 0.11
MSH5-206ENST00000423982 ZDHHC15Q96MV8 337 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 CD248Q9HCU0 757 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 POTEMA6NI47 508 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 RAD51CO43502 376 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 KIAA0754O94854 1291 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 CEP85LQ5SZL2 805 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 SWT1Q5T5J6 900 aaKnown RBP15.76■□□□□ 0.11
MSH5-206ENST00000423982 KDM7AQ6ZMT4 941 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 LRRC55Q6ZSA7 311 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 CEP89Q96ST8 783 aa15.76■□□□□ 0.11
MSH5-206ENST00000423982 MYCBPQ99417 103 aaPredicted RBP15.76■□□□□ 0.11
MSH5-206ENST00000423982 EPN3Q9H201 632 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms