RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 SLC9A2Q9UBY0 812 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 IPO11Q9UI26 975 aaKnown RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 CLDN3O15551 220 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 VIRMAQ69YN4 1812 aaKnown RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 UBE2SQ16763 222 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 NDUFAF2Q8N183 169 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 MFAP3P55082 362 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 HADHQ16836 314 aaKnown RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 FAM26FQ5R3K3 315 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 SFMBT2Q5VUG0 894 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 MRPL4Q9BYD3 311 aaKnown RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 NYAP2Q9P242 653 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 PDHXO00330 501 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 SRGAP1Q7Z6B7 1085 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 RHPN2Q8IUC4 686 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 MXD3Q9BW11 206 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 AKR1B15C9JRZ8 316 aaPredicted RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 PSMD2Q13200 908 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 RPUSD2Q8IZ73 545 aaKnown RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 FBXO18Q8NFZ0 1043 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 PCDHA10Q9Y5I2 948 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 BFSP1Q12934 665 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 ARL6IP4Q66PJ3 421 aaKnown RBP9.16□□□□□ -0.94
CHD7-201ENST00000423902 SYT17Q9BSW7 474 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 DPP7Q9UHL4 492 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 TTLL3Q9Y4R7 772 aa9.16□□□□□ -0.94
CHD7-201ENST00000423902 CCDC85CA6NKD9 419 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 PTK2Q05397 1052 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 PFKFB3Q16875 520 aaPredicted RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 SLC44A5Q8NCS7 719 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 TRIM62Q9BVG3 475 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 NKRFO15226 690 aaKnown RBP eCLIP9.15□□□□□ -0.941e-6■□□□□ 9.9
CHD7-201ENST00000423902 CYP21A2P08686 494 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 PSMC2P35998 433 aaKnown RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 PSMC5P62195 406 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 TUBB4BP68371 445 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 MYL7Q01449 175 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 TADA2BQ86TJ2 420 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 SIX6OS1Q8N1H7 587 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 GIPC1O14908 333 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 RPN1P04843 607 aaKnown RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 STAT5BP51692 787 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 RYBPQ8N488 228 aaPredicted RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 DDX50Q9BQ39 737 aaKnown RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 STMN4Q9H169 189 aaPredicted RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 SLIT3O75094 1523 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 A0A1W2PRG0 241 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 IPO5O00410 1097 aaKnown RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 GBP1P32455 592 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 GLIS2Q9BZE0 524 aaPredicted RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 RIC8AQ9NPQ8 531 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 ADCY5O95622 1261 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 GSPT1P15170 499 aaKnown RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 SARNPP82979 210 aaKnown RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 PPATQ06203 517 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 QRICH1Q2TAL8 776 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 ENAHQ8N8S7 591 aaPredicted RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 CCT6BQ92526 530 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 DNAJC25Q9H1X3 360 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 SLC38A7Q9NVC3 462 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 CWC15Q9P013 229 aaKnown RBP9.15□□□□□ -0.94
CHD7-201ENST00000423902 HOXA2O43364 376 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 ZNF568Q3ZCX4 644 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 RGMBQ6NW40 437 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 TRIML1Q8N9V2 468 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 PLA2G4BP0C869 781 aa9.15□□□□□ -0.94
CHD7-201ENST00000423902 BTBD18B2RXH4 712 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 SH3BP5O60239 455 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 URI1O94763 535 aaPredicted RBP9.15□□□□□ -0.95
CHD7-201ENST00000423902 NDUFB10O96000 172 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 CAP2P40123 477 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 ADAM9Q13443 819 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 CDCA5Q96FF9 252 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 TTC1Q99614 292 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 STARD7Q9NQZ5 370 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 STRNO43815 780 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 MTERF4Q7Z6M4 381 aaKnown RBP9.15□□□□□ -0.95
CHD7-201ENST00000423902 SAMD3Q8N6K7 520 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 RAB3IL1Q8TBN0 382 aa9.15□□□□□ -0.95
CHD7-201ENST00000423902 A6NJR5 290 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 PPP4CP60510 307 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 SNW1Q13573 536 aaKnown RBP9.14□□□□□ -0.95
CHD7-201ENST00000423902 TIPINQ9BVW5 301 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 MYO10Q9HD67 2058 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 MICAL3Q7RTP6 2002 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 C17orf102A2RUQ5 167 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 IL1R1P14778 569 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 CEP57Q86XR8 500 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 ZKSCAN4Q969J2 545 aaPredicted RBP9.14□□□□□ -0.95
CHD7-201ENST00000423902 TUBB4AP04350 444 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 HOXA10P31260 410 aaPredicted RBP9.14□□□□□ -0.95
CHD7-201ENST00000423902 EFNA5P52803 228 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 E2F5Q15329 346 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 SWSAP1Q6NVH7 229 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 MAIP1Q8WWC4 291 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 SYMPKQ92797 1274 aaKnown RBP9.14□□□□□ -0.95
CHD7-201ENST00000423902 TRIM11Q96F44 468 aa9.14□□□□□ -0.95
CHD7-201ENST00000423902 NT5C1BQ96P26 610 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms