RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PLVAPQ9BX97 442 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 ADGRA3Q8IWK6 1321 aa19.42■□□□□ 0.7
CHCHD3-202ENST00000423635 ATG2AQ2TAZ0 1938 aa19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 SPATA31C2B4DYI2 1134 aa19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 GCOM1H8Y6P7 765 aaPredicted RBP19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 ENPP3O14638 875 aa19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 STAM2O75886 525 aa19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 POLR2MP0CAP2 368 aa19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 SDSP20132 328 aa19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 TRIM67Q6ZTA4 783 aa19.41■□□□□ 0.7
CHCHD3-202ENST00000423635 PALM3A6NDB9 673 aaPredicted RBP19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 LINC01565O15544 149 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 PTPN5P54829 565 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 MRPS9P82933 396 aaKnown RBP19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 TRAF1Q13077 416 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 GNPTABQ3T906 1256 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 IER5LQ5T953 404 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 CYFIP1Q7L576 1253 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 LMBR1Q8WVP7 490 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 P2RX5Q93086 422 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 INPP4AQ96PE3 977 aaPredicted RBP19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 IGFLR1Q9H665 355 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 MAD2L2Q9UI95 211 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 ZNF215Q9UL58 517 aaPredicted RBP19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 PLAGL2Q9UPG8 496 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 NRCAMQ92823 1304 aa19.4■□□□□ 0.7
CHCHD3-202ENST00000423635 TMEM221A6NGB7 291 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 M0R296 226 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 ST18O60284 1047 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 DGKIO75912 1065 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 ARHGAP4P98171 946 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 MGAT3Q09327 533 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 SEMA3FQ13275 785 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 NAALADL2Q58DX5 795 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 FCHSD1Q86WN1 690 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 PBXIP1Q96AQ6 731 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 KRT23Q9C075 422 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 FRMPD4Q14CM0 1322 aa19.39■□□□□ 0.69
CHCHD3-202ENST00000423635 LOC730098B7Z3J9 87 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 GHRP10912 638 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 BTG3Q14201 252 aaPredicted RBP19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 LPIN1Q14693 890 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 CBX2Q14781 532 aaPredicted RBP19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 IFIT1BQ5T764 474 aaKnown RBP19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 TAF2Q6P1X5 1199 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 RILPL2Q969X0 211 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 SENP7Q9BQF6 1050 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 RIOX1Q9H6W3 641 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 ALG13Q9NP73 1137 aaKnown RBP19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 CLEC1BQ9P126 229 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 TTC3P53804 2025 aa19.38■□□□□ 0.69
CHCHD3-202ENST00000423635 FIBPO43427 364 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 ZXDAP98168 799 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 TCF15Q12870 199 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 COASYQ13057 564 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 SEC23AQ15436 765 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 SLC35G1Q2M3R5 365 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 TRIM50Q86XT4 487 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 CRIPAKQ8N1N5 446 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 EFHBQ8N7U6 833 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 SPPL3Q8TCT6 385 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 PPP2R3CQ969Q6 453 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 UBAC1Q9BSL1 405 aa19.37■□□□□ 0.69
CHCHD3-202ENST00000423635 DNAJB1P25685 340 aa19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 NDUFV1P49821 464 aa19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 IMMTQ16891 758 aaKnown RBP19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 UTP14CQ5TAP6 766 aaKnown RBP19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 SMRP1Q8NCR6 262 aa19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 PIGSQ96S52 555 aa19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 DSCC1Q9BVC3 393 aa19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 CNNM2Q9H8M5 875 aa19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 TELO2Q9Y4R8 837 aa19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
CHCHD3-202ENST00000423635 RRP1P56182 461 aaKnown RBP19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 FBXO47Q5MNV8 452 aa19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 RUFY4Q6ZNE9 571 aa19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 RSPH3Q86UC2 560 aa19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 CMTR2Q8IYT2 770 aaKnown RBP19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 RTEL1Q9NZ71 1219 aa19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 LAMA4Q16363 1823 aa19.35■□□□□ 0.69
CHCHD3-202ENST00000423635 PNMA6FA0A0J9YX94 578 aa19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 ITGB1P05556 798 aa19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 CWC27Q6UX04 472 aaKnown RBP19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 TSHZ1Q6ZSZ6 1077 aa19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 ADGRD2Q7Z7M1 963 aa19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 HOMER1Q86YM7 354 aa19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 SUGP1Q8IWZ8 645 aaKnown RBP19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 FBXL6Q8N531 539 aa19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 MRPL42Q9Y6G3 142 aaKnown RBP19.34■□□□□ 0.69
CHCHD3-202ENST00000423635 KAT6AQ92794 2004 aa19.33■□□□□ 0.69
CHCHD3-202ENST00000423635 MBLAC1A4D2B0 266 aaPredicted RBP19.33■□□□□ 0.69
CHCHD3-202ENST00000423635 CYTH3O43739 400 aa19.33■□□□□ 0.69
CHCHD3-202ENST00000423635 XRRA1Q6P2D8 792 aa19.33■□□□□ 0.69
CHCHD3-202ENST00000423635 RTN4RL1Q86UN2 441 aaPredicted RBP19.33■□□□□ 0.69
CHCHD3-202ENST00000423635 GIMAP8Q8ND71 665 aaPredicted RBP19.33■□□□□ 0.69
CHCHD3-202ENST00000423635 SQORQ9Y6N5 450 aa19.33■□□□□ 0.69
CHCHD3-202ENST00000423635 SIGLEC14Q08ET2 396 aa19.32■□□□□ 0.68
CHCHD3-202ENST00000423635 GRM4Q14833 912 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms