RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 ATP2A2P16615 1042 aaKnown RBP9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 RBL2Q08999 1139 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 PCNX4Q63HM2 1172 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 APOA5Q6Q788 366 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 USP17L6PQ6QN14 398 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 TMTC3Q6ZXV5 915 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 FANCBQ8NB91 859 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 NEK1Q96PY6 1258 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 ALG1Q9BT22 464 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 FTOQ9C0B1 505 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 BCAS3Q9H6U6 928 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 MLXIPQ9HAP2 919 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 SLC28A3Q9HAS3 691 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
TRIM43CP-201ENST00000422468 VCANP13611 3396 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 SPTBN5Q9NRC6 3674 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 NOP56O00567 594 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 BAIAP3O94812 1187 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 CKBP12277 381 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 RABGGTBP53611 331 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 APOBRQ0VD83 1088 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 SEMA3FQ13275 785 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 PTK7Q13308 1070 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 NEDD9Q14511 834 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 KRT32Q14532 448 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 SYNE3Q6ZMZ3 975 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 LRRC8DQ7L1W4 858 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 DHX32Q7L7V1 743 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 MICU3Q86XE3 530 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 PHOSPHO2Q8TCD6 241 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 JAKMIP1Q96N16 626 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 GAS2L1Q99501 681 aaPredicted RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 C16orf70Q9BSU1 422 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 UPF3BQ9BZI7 483 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 NKX2-4Q9H2Z4 354 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 PRDM12Q9H4Q4 367 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 PSTPIP2Q9H939 334 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 RTEL1Q9NZ71 1219 aa9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
TRIM43CP-201ENST00000422468 NID2Q14112 1375 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 H3BRB1 525 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 LGALS2P05162 132 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 RPS6KB1P23443 525 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 NTRK3Q16288 839 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 TRIM71Q2Q1W2 868 aaKnown RBP9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 METTL7BQ6UX53 244 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 CYFIP1Q7L576 1253 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 NLRX1Q86UT6 975 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 SLC9A7Q96T83 725 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 GPR20Q99678 358 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 SENP7Q9BQF6 1050 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 NCOA5Q9HCD5 579 aaKnown RBP9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 RBM28Q9NW13 759 aaKnown RBP9.4□□□□□ -0.9
TRIM43CP-201ENST00000422468 ZBTB43O43298 467 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 CXCL10P02778 98 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 HMGB1P09429 215 aaKnown RBP9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 SMIM10L2AP0DMW4 78 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 SMIM10L2BP0DMW5 78 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 MYOGP15173 224 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 HOXC8P31273 242 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 ADD1P35611 737 aaKnown RBP9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 EVCP57679 992 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 ZNF200P98182 395 aaPredicted RBP9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 HIC1Q14526 733 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 GPNMBQ14956 572 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 PKN1Q16512 942 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 PPP2R2DQ66LE6 453 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 CNKSR3Q6P9H4 555 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 Q6ZUG5 572 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 HEATR3Q7Z4Q2 680 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 SERINC5Q86VE9 423 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 HERC6Q8IVU3 1022 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 TEX2Q8IWB9 1127 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 WNT8BQ93098 351 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 GPRASP2Q96D09 838 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 CDHR1Q96JP9 859 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 UPF2Q9HAU5 1272 aaKnown RBP9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 MICAL3Q7RTP6 2002 aa9.39□□□□□ -0.91
TRIM43CP-201ENST00000422468 EMSYQ7Z589 1322 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 NBNO60934 754 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 EFCAB14O75071 495 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 CTDNEP1O95476 244 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 CA3P07451 260 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 ITGB5P18084 799 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 KCNJ6P48051 423 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 RCAN1P53805 252 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 WDR5P61964 334 aaKnown RBP9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 ADGRE1Q14246 886 aa9.38□□□□□ -0.91
TRIM43CP-201ENST00000422468 NPY5RQ15761 445 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms