RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 GRB10Q13322 594 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 KARSQ15046 597 aaKnown RBP24.17■■□□□ 1.46
ABCF3-202ENST00000421340 LONRF3Q496Y0 759 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 TMEM119Q4V9L6 283 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 CAVIN1Q6NZI2 390 aaKnown RBP24.17■■□□□ 1.46
ABCF3-202ENST00000421340 METTL7BQ6UX53 244 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 CATSPER3Q86XQ3 398 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 PDILTQ8N807 584 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 ZNF296Q8WUU4 475 aaPredicted RBP24.17■■□□□ 1.46
ABCF3-202ENST00000421340 CDK5RAP3Q96JB5 506 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 PANK2Q9BZ23 570 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 MAGEF1Q9HAY2 307 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 LRRC37A2A6NM11 1700 aa24.17■■□□□ 1.46
ABCF3-202ENST00000421340 NKRFO15226 690 aaKnown RBP eCLIP24.16■■□□□ 1.46
ABCF3-202ENST00000421340 ACTN4O43707 911 aaKnown RBP24.16■■□□□ 1.46
ABCF3-202ENST00000421340 SLITRK3O94933 977 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 ATG7O95352 703 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 CCNE2O96020 404 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 SPATA31C1P0DKV0 1188 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 TXNP10599 105 aaKnown RBP24.16■■□□□ 1.46
ABCF3-202ENST00000421340 CCL14Q16627 93 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 CELF3Q5SZQ8 465 aaKnown RBP24.16■■□□□ 1.46
ABCF3-202ENST00000421340 CNNM3Q8NE01 707 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 RASSF8Q8NHQ8 419 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 PNMA5Q96PV4 448 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 NUP62CLQ9H1M0 184 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 PDGFCQ9NRA1 345 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 TMEM63CQ9P1W3 806 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 STK17AQ9UEE5 414 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 HOOK1Q9UJC3 728 aaKnown RBP24.16■■□□□ 1.46
ABCF3-202ENST00000421340 PCDHA10Q9Y5I2 948 aa24.16■■□□□ 1.46
ABCF3-202ENST00000421340 PLXNA1Q9UIW2 1896 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 DDX39AO00148 427 aaKnown RBP24.15■■□□□ 1.46
ABCF3-202ENST00000421340 CHMP2AO43633 222 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 FARP2O94887 1054 aaPredicted RBP24.15■■□□□ 1.46
ABCF3-202ENST00000421340 ARIH2O95376 493 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 P4HBP07237 508 aaKnown RBP24.15■■□□□ 1.46
ABCF3-202ENST00000421340 STAT6P42226 847 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 CAP1Q01518 475 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 LY6KQ17RY6 165 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 MFSD14CQ5VZR4 134 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 CYFIP1Q7L576 1253 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 CEP57L1Q8IYX8 460 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 EMID1Q96A84 441 aaPredicted RBP24.15■■□□□ 1.46
ABCF3-202ENST00000421340 DHX58Q96C10 678 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 SERTAD1Q9UHV2 236 aa24.15■■□□□ 1.46
ABCF3-202ENST00000421340 MGAMO43451 1857 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 MED24O75448 989 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 LYPLA2O95372 231 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 GGPS1O95749 300 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 ZNF865P0CJ78 1059 aaPredicted RBP24.14■■□□□ 1.45
ABCF3-202ENST00000421340 PLCG1P19174 1290 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 ACTR2P61160 394 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 LAMC2Q13753 1193 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 DUSP28Q4G0W2 176 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 NAALADL2Q58DX5 795 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 PDXDC2PQ6P474 469 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 ABHD15Q6UXT9 468 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 MLXIPQ9HAP2 919 aa24.14■■□□□ 1.45
ABCF3-202ENST00000421340 DKC1O60832 514 aaKnown RBP eCLIP24.13■■□□□ 1.45
ABCF3-202ENST00000421340 PSAPP07602 524 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 CYP2C19P33261 490 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 ECM1Q16610 540 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 MIS18BP1Q6P0N0 1132 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 SH3RF1Q7Z6J0 888 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 DHX37Q8IY37 1157 aaKnown RBP24.13■■□□□ 1.45
ABCF3-202ENST00000421340 PXYLP1Q8TE99 480 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 DYDC2Q96IM9 177 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 TNMDQ9H2S6 317 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 BCAS3Q9H6U6 928 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 KIAA1024Q9UPX6 916 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 SAMM50Q9Y512 469 aa24.13■■□□□ 1.45
ABCF3-202ENST00000421340 GH1P01241 217 aa24.12■■□□□ 1.45
ABCF3-202ENST00000421340 MYL1P05976 194 aa24.12■■□□□ 1.45
ABCF3-202ENST00000421340 XRCC6P12956 609 aaKnown RBP eCLIP24.12■■□□□ 1.45
ABCF3-202ENST00000421340 QARSP47897 775 aaKnown RBP24.12■■□□□ 1.45
ABCF3-202ENST00000421340 MDM2Q00987 491 aaPredicted RBP24.12■■□□□ 1.45
ABCF3-202ENST00000421340 RBM43Q6ZSC3 357 aaKnown RBP24.12■■□□□ 1.45
ABCF3-202ENST00000421340 SEPT1Q8WYJ6 367 aa24.12■■□□□ 1.45
ABCF3-202ENST00000421340 ZSWIM4Q9H7M6 989 aa24.12■■□□□ 1.45
ABCF3-202ENST00000421340 RGL1Q9NZL6 768 aa24.12■■□□□ 1.45
ABCF3-202ENST00000421340 ZHX1Q9UKY1 873 aaPredicted RBP24.12■■□□□ 1.45
ABCF3-202ENST00000421340 IGKV6D-21A0A0A0MT36 114 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 ADCYAP1R1P41586 468 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 PSMC5P62195 406 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 ZRSR1Q15695 479 aaKnown RBP24.11■■□□□ 1.45
ABCF3-202ENST00000421340 CCDC144BQ3MJ40 725 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 TRIB2Q92519 343 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 RAD54LQ92698 747 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 PAGE5Q96GU1 130 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 NACC1Q96RE7 527 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 LRRC27Q9C0I9 530 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 BLOC1S4Q9NUP1 217 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 KBTBD4Q9NVX7 518 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 FAM184BQ9ULE4 1060 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 DNM3Q9UQ16 869 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 Q9Y3F1 56 aa24.11■■□□□ 1.45
ABCF3-202ENST00000421340 KIAA1217Q5T5P2 1943 aa24.1■■□□□ 1.45
ABCF3-202ENST00000421340 POTEB3A0JP26 581 aa24.1■■□□□ 1.45
ABCF3-202ENST00000421340 SUPT20HL2P0C7V6 817 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms