RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 PTK7Q13308 1070 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 TRIM71Q2Q1W2 868 aaKnown RBP9.72□□□□□ -0.85
GACAT1-201ENST00000419650 CEP55Q53EZ4 464 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 RPUSD2Q8IZ73 545 aaKnown RBP9.72□□□□□ -0.85
GACAT1-201ENST00000419650 CCDC148Q8NFR7 591 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 AFAP1L1Q8TED9 768 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 GUCD1Q96NT3 240 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 MTIF3Q9H2K0 278 aaKnown RBP9.72□□□□□ -0.85
GACAT1-201ENST00000419650 JPH1Q9HDC5 661 aaPredicted RBP9.72□□□□□ -0.85
GACAT1-201ENST00000419650 SLC9A2Q9UBY0 812 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 ZNF215Q9UL58 517 aaPredicted RBP9.72□□□□□ -0.85
GACAT1-201ENST00000419650 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 SZT2Q5T011 3432 aa9.72□□□□□ -0.85
GACAT1-201ENST00000419650 SIP14410 1827 aa9.71□□□□□ -0.85
GACAT1-201ENST00000419650 FAM86B1E9PN63 330 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 MAFGO15525 162 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 SEC24BO95487 1268 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 PFKMP08237 780 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 FAM86B2P0C5J1 330 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 ARP10275 920 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 CKBP12277 381 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 GNA11P29992 359 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 HOXC8P31273 242 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 RFC2P35250 354 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 ZNF76P36508 570 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 PBX2P40425 430 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 CLCN6P51797 869 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 AK2P54819 239 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 RBL2Q08999 1139 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 ITGB3BPQ13352 177 aaPredicted RBP9.71□□□□□ -0.86
GACAT1-201ENST00000419650 ZNF618Q5T7W0 954 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 LRRC8DQ7L1W4 858 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 SERINC5Q86VE9 423 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 PLA2G4DQ86XP0 818 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 LMBR1Q8WVP7 490 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 CRYGNQ8WXF5 182 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 AIFM3Q96NN9 605 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 UIMC1Q96RL1 719 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 SDF4Q9BRK5 362 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 FTOQ9C0B1 505 aaKnown RBP eCLIP9.71□□□□□ -0.86
GACAT1-201ENST00000419650 TTYH1Q9H313 450 aaPredicted RBP9.71□□□□□ -0.86
GACAT1-201ENST00000419650 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 AGO4Q9HCK5 861 aaKnown RBP9.71□□□□□ -0.86
GACAT1-201ENST00000419650 SETD4Q9NVD3 440 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 TPCN1Q9ULQ1 816 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 SLC4A7Q9Y6M7 1214 aa9.71□□□□□ -0.86
GACAT1-201ENST00000419650 MYH9P35579 1960 aaKnown RBP9.7□□□□□ -0.86
GACAT1-201ENST00000419650 MICAL3Q7RTP6 2002 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 IGLV3-22A0A075B6J6 115 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 DDX39AO00148 427 aaKnown RBP9.7□□□□□ -0.86
GACAT1-201ENST00000419650 MEIS1O00470 390 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 TREHO43280 583 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 NBNO60934 754 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 DTNBO60941 627 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 DEXIO95424 95 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 ACTN1P12814 892 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 MARK3P27448 753 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 THPOP40225 353 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 NLRP5P59047 1200 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 SCRN1Q12765 414 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 GPNMBQ14956 572 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 MCTP2Q6DN12 878 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 CPLX2Q6PUV4 134 aaKnown RBP9.7□□□□□ -0.86
GACAT1-201ENST00000419650 BICD2Q8TD16 824 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 SEPT1Q8WYJ6 367 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 GLG1Q92896 1179 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 SLKQ9H2G2 1235 aaPredicted RBP9.7□□□□□ -0.86
GACAT1-201ENST00000419650 SEMA6BQ9H3T3 888 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 SH3GLB2Q9NR46 395 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 NFASCO94856 1347 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 EMSYQ7Z589 1322 aa9.7□□□□□ -0.86
GACAT1-201ENST00000419650 TMEM265A0A087WTH1 108 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 PFKFB2O60825 505 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 LGR5O75473 907 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 CDKL5O76039 1030 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 LARGE1O95461 756 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 CCNE2O96020 404 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 CYP3A4P08684 503 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 CTSHP09668 335 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 ATP2A2P16615 1042 aaKnown RBP9.69□□□□□ -0.86
GACAT1-201ENST00000419650 LAMA2P24043 3122 aaKnown RBP9.69□□□□□ -0.86
GACAT1-201ENST00000419650 RABGGTBP53611 331 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 ACTR2P61160 394 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 MBTPS1Q14703 1052 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 RAB30Q15771 203 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 TRAF7Q6Q0C0 670 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 NIPA1Q7RTP0 329 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 LOXHD1Q8IVV2 1947 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 TIFAQ96CG3 184 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 IL17RAQ96F46 866 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 PCYT2Q99447 389 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 CDX2Q99626 313 aaPredicted RBP9.69□□□□□ -0.86
GACAT1-201ENST00000419650 SMARCAD1Q9H4L7 1026 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 ERAP1Q9NZ08 941 aa9.69□□□□□ -0.86
GACAT1-201ENST00000419650 STXBP5LQ9Y2K9 1186 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms