RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ANO9A1A5B4 782 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 TRAF5O00463 557 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 COBLO75128 1261 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PRELPP51888 382 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 FRMD5Q7Z6J6 570 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 RABGGTAQ92696 567 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 P2RX7Q99572 595 aaKnown RBP16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 HSD17B14Q9BPX1 270 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 EIF2AK1Q9BQI3 630 aaKnown RBP16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 KCTD10Q9H3F6 313 aa16.08■□□□□ 0.17
HLA-DPA1-242ENST00000419277 FRMPD4Q14CM0 1322 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 RPTORQ8N122 1335 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 PARP14Q460N5 1801 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 SSU72P8A0A1W2PR75 194 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 MEIS1O00470 390 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 GAS7O60861 476 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 GIT2Q14161 759 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 SPA17Q15506 151 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ELF2Q15723 593 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 KNOP1Q1ED39 458 aaKnown RBP16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 WDR59Q6PJI9 974 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 EPM2AIP1Q7L775 607 aaPredicted RBP16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 OTOP1Q7RTM1 612 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 LDHDQ86WU2 507 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 TRIM59Q8IWR1 403 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 NEK11Q8NG66 645 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 SCFD1Q8WVM8 642 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 GOLGA1Q92805 767 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 NACC1Q96RE7 527 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CEP72Q9P209 647 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CD2APQ9Y5K6 639 aa16.08■□□□□ 0.16
HLA-DPA1-242ENST00000419277 PHF20L1A8MW92 1017 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ATP8B1O43520 1251 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 USO1O60763 962 aaKnown RBP16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 LCA5LO95447 670 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 H2AFXP16104 143 aaPredicted RBP16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 HOXA13P31271 388 aaPredicted RBP16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ALCAMQ13740 583 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ARSHQ5FYA8 562 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 XRRA1Q6P2D8 792 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 GOLGA5Q8TBA6 731 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 TSC1Q92574 1164 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 TEKT3Q9BXF9 490 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 TYW1Q9NV66 732 aaKnown RBP16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 MYO6Q9UM54 1294 aa16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
HLA-DPA1-242ENST00000419277 FANCGO15287 622 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 PPP1R12BO60237 982 aaPredicted RBP16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ANXA13P27216 316 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 RASA3Q14644 834 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 EPHA7Q15375 998 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CCDC42Q96M95 316 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 TIPINQ9BVW5 301 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 NHEJ1Q9H9Q4 299 aaPredicted RBP16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 AS3MTQ9HBK9 375 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CCPG1Q9ULG6 757 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ATP8B3O60423 1300 aa16.06■□□□□ 0.16
HLA-DPA1-242ENST00000419277 STAT3P40763 770 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ARHGAP25P42331 645 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 EPS15P42566 896 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 VAV2P52735 878 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 KIAA1755Q5JYT7 1200 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 KIAA1328Q86T90 577 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ACRBPQ8NEB7 543 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 TEPSINQ96N21 525 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ZNF341Q9BYN7 854 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 FBXL5Q9UKA1 691 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 PPP2R3BQ9Y5P8 575 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 MYH11P35749 1972 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 RNF225M0QZC1 329 aaPredicted RBP16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ZNF131P52739 623 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 KIF5AQ12840 1032 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 PCNX4Q63HM2 1172 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CCDC174Q6PII3 467 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 APOBEC3FQ8IUX4 373 aaKnown RBP16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 TRIM58Q8NG06 486 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CHP1Q99653 195 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 MXRA8Q9BRK3 442 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 ZNF577Q9BSK1 485 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 WDR18Q9BV38 432 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 CARD6Q9BX69 1037 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 BHMT2Q9H2M3 363 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 SLC38A10Q9HBR0 1119 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 AGPAT5Q9NUQ2 364 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
HLA-DPA1-242ENST00000419277 GTPBP10A4D1E9 387 aaKnown RBP16.04■□□□□ 0.16
HLA-DPA1-242ENST00000419277 IPO5O00410 1097 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms