RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 RIT2Q99578 217 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 MXRA8Q9BRK3 442 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 MOV10L1Q9BXT6 1211 aaKnown RBP6.68□□□□□ -1.34
HMGB3-202ENST00000419110 DNAJC25Q9H1X3 360 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 MROH8Q9H579 483 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 EXOC1Q9NV70 894 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 CYP39A1Q9NYL5 469 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 BTBD7Q9P203 1132 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 TUBE1Q9UJT0 475 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 RIPK3Q9Y572 518 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 IVNS1ABPQ9Y6Y0 642 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 PASKQ96RG2 1323 aa6.68□□□□□ -1.34
HMGB3-202ENST00000419110 LOC102724159A0A0B4J2E5 919 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 GOLGA8CPA6NN73 597 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 WDR64B1ANS9 1081 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 BTBD19C9JJ37 291 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 MEIS1O00470 390 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 BIN1O00499 593 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 CNMDO75829 334 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 KRT18P05783 430 aaKnown RBP6.67□□□□□ -1.34
HMGB3-202ENST00000419110 ERCC3P19447 782 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 MUTP22033 750 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 ZNF165P49910 485 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 ALDH5A1P51649 535 aaPredicted RBP6.67□□□□□ -1.34
HMGB3-202ENST00000419110 ZNF157P51786 506 aaPredicted RBP6.67□□□□□ -1.34
HMGB3-202ENST00000419110 JAK3P52333 1124 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 KRT76Q01546 638 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 PDE4DQ08499 809 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 SPIRE1Q08AE8 756 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 SEMA3FQ13275 785 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 STIM1Q13586 685 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 PWP2Q15269 919 aaKnown RBP6.67□□□□□ -1.34
HMGB3-202ENST00000419110 FAM110CQ1W6H9 321 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 UVSSAQ2YD98 709 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 DPCR1Q3MIW9 517 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 HYIQ5T013 277 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 RGMBQ6NW40 437 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 C11orf57Q6ZUT1 292 aaPredicted RBP6.67□□□□□ -1.34
HMGB3-202ENST00000419110 PAXIP1Q6ZW49 1069 aaPredicted RBP6.67□□□□□ -1.34
HMGB3-202ENST00000419110 GAS2L3Q86XJ1 694 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 GRAMD1CQ8IYS0 662 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 KCTD17Q8N5Z5 321 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 AOPEPQ8N6M6 819 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 TBC1D5Q92609 795 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 RAD54LQ92698 747 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 PAGE5Q96GU1 130 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 GSDMAQ96QA5 445 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 TAAR1Q96RJ0 339 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 IWS1Q96ST2 819 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 BPIFA3Q9BQP9 254 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 PANK2Q9BZ23 570 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 RBSNQ9H1K0 784 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 TUFT1Q9NNX1 390 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 JADE2Q9NQC1 790 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 TBC1D22BQ9NU19 505 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 PKD2L1Q9P0L9 805 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 MAN1B1Q9UKM7 699 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 ABT1Q9ULW3 272 aaKnown RBP6.67□□□□□ -1.34
HMGB3-202ENST00000419110 UBIAD1Q9Y5Z9 338 aa6.67□□□□□ -1.34
HMGB3-202ENST00000419110 DDX39AO00148 427 aaKnown RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 FOXN1O15353 648 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 EDIL3O43854 480 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 DKC1O60832 514 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 TBCAO75347 108 aaKnown RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 PSMD10O75832 226 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 ITGBL1O95965 494 aaPredicted RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 RPN1P04843 607 aaKnown RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 SSBP05455 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 NR3C2P08235 984 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 CYP2C8P10632 490 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 FCER1AP12319 257 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 RPA1P27694 616 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 CDC25AP30304 524 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 SFNP31947 248 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 PPP1R2P41236 205 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 MYL5Q02045 173 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 CCDC173Q0VFZ6 552 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 DPYDQ12882 1025 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 GRB10Q13322 594 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 TAF1CQ15572 869 aaPredicted RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 STXBP2Q15833 593 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 NAALADL2Q58DX5 795 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 NT5DC1Q5TFE4 455 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 CNNM4Q6P4Q7 775 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 SV2BQ7L1I2 683 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 MIER3Q7Z3K6 550 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 SH3RF1Q7Z6J0 888 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 MLKLQ8NB16 471 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 GPRC5AQ8NFJ5 357 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 RDM1Q8NG50 284 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 ERCC4Q92889 916 aaPredicted RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 INPP4AQ96PE3 977 aaPredicted RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 PLIN2Q99541 437 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 LXNQ9BS40 222 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 MMTAG2Q9BU76 263 aaKnown RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 POLR3CQ9BUI4 534 aaPredicted RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 CBX8Q9HC52 389 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 AGO4Q9HCK5 861 aaKnown RBP6.66□□□□□ -1.34
HMGB3-202ENST00000419110 KCNH7Q9NS40 1196 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms