RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GJA4P35212 333 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 SOX5P35711 763 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 STAT3P40763 770 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 STAT5AP42229 794 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 MECP2P51608 486 aaKnown RBP3.73□□□□□ -1.81
VPS41-206ENST00000418457 EPHB3P54753 998 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 NKX3-2P78367 333 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 IRF9Q00978 393 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 PAN2Q504Q3 1202 aaKnown RBP3.73□□□□□ -1.81
VPS41-206ENST00000418457 CT47A1Q5JQC4 288 aaPredicted RBP3.73□□□□□ -1.81
VPS41-206ENST00000418457 ZNF648Q5T619 568 aaPredicted RBP3.73□□□□□ -1.81
VPS41-206ENST00000418457 BTBD8Q5XKL5 378 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 PKN3Q6P5Z2 889 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 CD300LDQ6UXZ3 194 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 OTOP1Q7RTM1 612 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 FILIP1Q7Z7B0 1213 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 B3GNT8Q7Z7M8 397 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 KIF18BQ86Y91 864 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 IGDCC3Q8IVU1 814 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 POU5F2Q8N7G0 328 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 CHAC2Q8WUX2 184 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 LEO1Q8WVC0 666 aaPredicted RBP3.73□□□□□ -1.81
VPS41-206ENST00000418457 PDGFDQ9GZP0 370 aaPredicted RBP3.73□□□□□ -1.81
VPS41-206ENST00000418457 CAAP1Q9H8G2 361 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 SPC25Q9HBM1 224 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 RIC8BQ9NVN3 520 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 B4GALT6Q9UBX8 382 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 ZKSCAN5Q9Y2L8 839 aa3.73□□□□□ -1.81
VPS41-206ENST00000418457 SCDO00767 359 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 LRG1P02750 347 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 C8BP07358 591 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 MED14OSP0DP75 135 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 CYP2C8P10632 490 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 ATF2P15336 505 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 FAHP16930 419 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 IGFBP6P24592 240 aaPredicted RBP3.72□□□□□ -1.81
VPS41-206ENST00000418457 CNGA1P29973 690 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 MC3RP41968 323 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 SCNN1BP51168 640 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 SART3Q15020 963 aaKnown RBP3.72□□□□□ -1.81
VPS41-206ENST00000418457 SEPT7Q16181 437 aaKnown RBP3.72□□□□□ -1.81
VPS41-206ENST00000418457 CPZQ66K79 652 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 TEPPQ6URK8 271 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 ATG14Q6ZNE5 492 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 DDX46Q7L014 1031 aaKnown RBP3.72□□□□□ -1.81
VPS41-206ENST00000418457 KRT26Q7Z3Y9 468 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 RNF180Q86T96 592 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 NOSTRINQ8IVI9 506 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 FAM26EQ8N5C1 309 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 UBR7Q8N806 425 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 BHLHE22Q8NFJ8 381 aaPredicted RBP3.72□□□□□ -1.81
VPS41-206ENST00000418457 OR2W6PQ8NHA6 318 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 SMARCC2Q8TAQ2 1214 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 SIGLEC10Q96LC7 697 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.72□□□□□ -1.81
VPS41-206ENST00000418457 PCDH18Q9HCL0 1135 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 IFT57Q9NWB7 429 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 IRAK3Q9Y616 596 aa3.72□□□□□ -1.81
VPS41-206ENST00000418457 ANKRD62A6NC57 917 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 PRAMEF25A6NGN4 478 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 FAM90A27PA6NNH2 459 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 ZNF891A8MT65 544 aaPredicted RBP3.71□□□□□ -1.82
VPS41-206ENST00000418457 H7C1D1 291 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 ACOT7O00154 380 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 TSPAN15O95858 294 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 F2P00734 622 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 KRT1P04264 644 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 VIL1P09327 827 aaKnown RBP3.71□□□□□ -1.82
VPS41-206ENST00000418457 C1QTNF9P0C862 333 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 ZBTB48P10074 688 aaPredicted RBP3.71□□□□□ -1.82
VPS41-206ENST00000418457 TXKP42681 527 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 LIMS1P48059 325 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 FOXO4P98177 505 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 DSG1Q02413 1049 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 ZNF174Q15697 407 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 PKN1Q16512 942 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 CR1LQ2VPA4 569 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 SKOR2Q2VWA4 1001 aaPredicted RBP3.71□□□□□ -1.82
VPS41-206ENST00000418457 FSTL4Q6MZW2 842 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 NXPE1Q8N323 547 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 PCIF1Q9H4Z3 704 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 KCNH7Q9NS40 1196 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 HSPBP1Q9NZL4 362 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 CNOT6Q9ULM6 557 aaKnown RBP3.71□□□□□ -1.82
VPS41-206ENST00000418457 B3GALT1Q9Y5Z6 326 aa3.71□□□□□ -1.82
VPS41-206ENST00000418457 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.7□□□□□ -1.82
VPS41-206ENST00000418457 RFXAPO00287 272 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 C4BPAP04003 597 aaKnown RBP3.7□□□□□ -1.82
VPS41-206ENST00000418457 ATP2A2P16615 1042 aaKnown RBP3.7□□□□□ -1.82
VPS41-206ENST00000418457 CPEP16870 476 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 PI3P19957 117 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 RAP1GAPP47736 663 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 KIF11P52732 1056 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 IL2P60568 153 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 OCRLQ01968 901 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 SSPNQ14714 243 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 TMEM132BQ14DG7 1078 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 DHCR24Q15392 516 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 SEC23AQ15436 765 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 CD276Q5ZPR3 534 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms