RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 LINC01565O15544 149 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 MBTPS2O43462 519 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 CAND2O75155 1236 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 NT5C2P49902 561 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 MRPS9P82933 396 aaKnown RBP16.44■□□□□ 0.22
TTC38-202ENST00000417709 NEDD9Q14511 834 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 FAM26DQ5JW98 314 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 SAMD3Q8N6K7 520 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
TTC38-202ENST00000417709 KCNH6Q9H252 994 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 RALGAPA2Q2PPJ7 1873 aa16.44■□□□□ 0.22
TTC38-202ENST00000417709 TTC3P53804 2025 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 CACNA1HO95180 2353 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 STXBP3O00186 592 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 GHRP10912 638 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 BTG3Q14201 252 aaPredicted RBP16.43■□□□□ 0.22
TTC38-202ENST00000417709 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 GNPTABQ3T906 1256 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 METTL7BQ6UX53 244 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 LMBR1Q8WVP7 490 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
TTC38-202ENST00000417709 C5orf67F2Z3F1 127 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 ADAM17P78536 824 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 TRAF1Q13077 416 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 ADAM15Q13444 863 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
TTC38-202ENST00000417709 SEC23AQ15436 765 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 EDAQ92838 391 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 PHOX2BQ99453 314 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 POP1Q99575 1024 aaKnown RBP16.42■□□□□ 0.22
TTC38-202ENST00000417709 LMAN2LQ9H0V9 348 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 CD207Q9UJ71 328 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 ZNF215Q9UL58 517 aaPredicted RBP16.42■□□□□ 0.22
TTC38-202ENST00000417709 ATG2AQ2TAZ0 1938 aa16.42■□□□□ 0.22
TTC38-202ENST00000417709 RIF1Q5UIP0 2472 aaKnown RBP16.41■□□□□ 0.22
TTC38-202ENST00000417709 PNMA6FA0A0J9YX94 578 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 ICAM3P32942 547 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 LPIN1Q14693 890 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 HERC4Q5GLZ8 1057 aaPredicted RBP16.41■□□□□ 0.22
TTC38-202ENST00000417709 PBXIP1Q96AQ6 731 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 PLAGL2Q9UPG8 496 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
TTC38-202ENST00000417709 TBX10O75333 385 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 LINC00271P0C7V0 271 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 NDUFV1P49821 464 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
TTC38-202ENST00000417709 CAMK1Q14012 370 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 IER5LQ5T953 404 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 DNAJB3Q8WWF6 145 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 CLP1Q92989 425 aaKnown RBP16.4■□□□□ 0.22
TTC38-202ENST00000417709 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
TTC38-202ENST00000417709 EHMT1Q9H9B1 1298 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 NRCAMQ92823 1304 aa16.4■□□□□ 0.22
TTC38-202ENST00000417709 IFIT3O14879 490 aaKnown RBP16.39■□□□□ 0.21
TTC38-202ENST00000417709 FIBPO43427 364 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 CYTH3O43739 400 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 PPFIA3O75145 1194 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 STAM2O75886 525 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 DNAJB1P25685 340 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 GRM4Q14833 912 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 USP17L6PQ6QN14 398 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 RBM23Q86U06 439 aaKnown RBP16.39■□□□□ 0.21
TTC38-202ENST00000417709 RSPH3Q86UC2 560 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 RTN4RL1Q86UN2 441 aaPredicted RBP16.39■□□□□ 0.21
TTC38-202ENST00000417709 ZNF689Q96CS4 500 aaPredicted RBP16.39■□□□□ 0.21
TTC38-202ENST00000417709 SENP2Q9HC62 589 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 ADGRA3Q8IWK6 1321 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 LOXHD1Q8IVV2 1947 aa16.39■□□□□ 0.21
TTC38-202ENST00000417709 DGKIO75912 1065 aa16.38■□□□□ 0.21
TTC38-202ENST00000417709 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
TTC38-202ENST00000417709 PPFIA1Q13136 1202 aa16.38■□□□□ 0.21
TTC38-202ENST00000417709 TRIM67Q6ZTA4 783 aa16.38■□□□□ 0.21
TTC38-202ENST00000417709 SPPL3Q8TCT6 385 aa16.38■□□□□ 0.21
TTC38-202ENST00000417709 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
TTC38-202ENST00000417709 MRPL42Q9Y6G3 142 aaKnown RBP16.38■□□□□ 0.21
TTC38-202ENST00000417709 TMEM221A6NGB7 291 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 M0R296 226 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 HIP1O00291 1037 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 ATP9AO75110 1047 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 MMP1P03956 469 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 ITGB1P05556 798 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 IBSPP21815 317 aaPredicted RBP16.37■□□□□ 0.21
TTC38-202ENST00000417709 MARK3P27448 753 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 CD52P31358 61 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
TTC38-202ENST00000417709 IGBP1P78318 339 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 MGAT3Q09327 533 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 TRDNQ13061 729 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 GRIK4Q16099 956 aa16.37■□□□□ 0.21
TTC38-202ENST00000417709 PAN2Q504Q3 1202 aaKnown RBP16.37■□□□□ 0.21
TTC38-202ENST00000417709 FBXO47Q5MNV8 452 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms