RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
RPS28-201ENST00000417088 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
RPS28-201ENST00000417088 KCNA2P16389 499 aa17.04■□□□□ 0.32
RPS28-201ENST00000417088 ITGB5P18084 799 aa17.04■□□□□ 0.32
RPS28-201ENST00000417088 LIFRP42702 1097 aa17.04■□□□□ 0.32
RPS28-201ENST00000417088 TOP1MTQ969P6 601 aa17.04■□□□□ 0.32
RPS28-201ENST00000417088 GPRASP2Q96D09 838 aa17.04■□□□□ 0.32
RPS28-201ENST00000417088 ESYT1Q9BSJ8 1104 aa17.04■□□□□ 0.32
RPS28-201ENST00000417088 RAPGEFL1Q9UHV5 662 aa17.04■□□□□ 0.32
RPS28-201ENST00000417088 SIP14410 1827 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 NRCAMQ92823 1304 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 hCG_1642624A0A1W2PR95 340 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 CALM1P0DP23 149 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 CALM2P0DP24 149 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 CALM3P0DP25 149 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 TCF7P36402 384 aaPredicted RBP17.03■□□□□ 0.32
RPS28-201ENST00000417088 UBE2SQ16763 222 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 RAB11FIP4Q86YS3 637 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 YME1L1Q96TA2 773 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
RPS28-201ENST00000417088 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.02■□□□□ 0.32
RPS28-201ENST00000417088 GSTTP1A0A1W2PQM5 241 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 UPP2O95045 317 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 CHRNA1P02708 482 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 NECTIN1Q15223 517 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 EPC2Q52LR7 807 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 RUFY4Q6ZNE9 571 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 RPAINQ86UA6 219 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 SEPT1Q8WYJ6 367 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 APBB2Q92870 758 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 CDHR1Q96JP9 859 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 SAMD11Q96NU1 681 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 C1QTNF1Q9BXJ1 281 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 UBE2ZQ9H832 354 aaPredicted RBP17.02■□□□□ 0.32
RPS28-201ENST00000417088 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
RPS28-201ENST00000417088 TMTC3Q6ZXV5 915 aa17.01■□□□□ 0.31
RPS28-201ENST00000417088 FANCBQ8NB91 859 aa17.01■□□□□ 0.31
RPS28-201ENST00000417088 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
RPS28-201ENST00000417088 IFIH1Q9BYX4 1025 aaKnown RBP17.01■□□□□ 0.31
RPS28-201ENST00000417088 EPHX3Q9H6B9 360 aa17.01■□□□□ 0.31
RPS28-201ENST00000417088 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
RPS28-201ENST00000417088 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
RPS28-201ENST00000417088 H3BNC9 293 aa17■□□□□ 0.31
RPS28-201ENST00000417088 MGAT3Q09327 533 aa17■□□□□ 0.31
RPS28-201ENST00000417088 PPFIA1Q13136 1202 aa17■□□□□ 0.31
RPS28-201ENST00000417088 MTMR1Q13613 665 aa17■□□□□ 0.31
RPS28-201ENST00000417088 TAF2Q6P1X5 1199 aa17■□□□□ 0.31
RPS28-201ENST00000417088 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
RPS28-201ENST00000417088 JADE2Q9NQC1 790 aa17■□□□□ 0.31
RPS28-201ENST00000417088 ERAP1Q9NZ08 941 aa17■□□□□ 0.31
RPS28-201ENST00000417088 PKD2L1Q9P0L9 805 aa17■□□□□ 0.31
RPS28-201ENST00000417088 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 SPDYE3A6NKU9 549 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 MAFGO15525 162 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 GHRP10912 638 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 MARK3P27448 753 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 GPM6BQ13491 265 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 LPIN1Q14693 890 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 GRIK4Q16099 956 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 PTPROQ16827 1216 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 LEXMQ3ZCV2 418 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 MARCH8Q5T0T0 291 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 HEATR3Q7Z4Q2 680 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 SGMS1Q86VZ5 419 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 TMEM192Q8IY95 271 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 GLG1Q92896 1179 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 SMARCAD1Q9H4L7 1026 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 ANO2Q9NQ90 1003 aa16.99■□□□□ 0.31
RPS28-201ENST00000417088 COL4A6Q14031 1691 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 MBLAC1A4D2B0 266 aaPredicted RBP16.98■□□□□ 0.31
RPS28-201ENST00000417088 KCNA5P22460 613 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 RSPH3Q86UC2 560 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.98■□□□□ 0.31
RPS28-201ENST00000417088 DNAJB3Q8WWF6 145 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 KHSRPQ92945 711 aaKnown RBP eCLIP16.98■□□□□ 0.31
RPS28-201ENST00000417088 IL17RAQ96F46 866 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 PCYT2Q99447 389 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 CD320Q9NPF0 282 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 TUBE1Q9UJT0 475 aa16.98■□□□□ 0.31
RPS28-201ENST00000417088 MYO7AQ13402 2215 aa16.97■□□□□ 0.31
RPS28-201ENST00000417088 FBXO47Q5MNV8 452 aa16.97■□□□□ 0.31
RPS28-201ENST00000417088 WWC2Q6AWC2 1192 aa16.97■□□□□ 0.31
RPS28-201ENST00000417088 ZBTB10Q96DT7 871 aa16.97■□□□□ 0.31
RPS28-201ENST00000417088 MXRA8Q9BRK3 442 aa16.97■□□□□ 0.31
RPS28-201ENST00000417088 CNTNAP5Q8WYK1 1306 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 ENPP3O14638 875 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 INSRRP14616 1297 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 IGBP1P78318 339 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 TIGD5Q53EQ6 642 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 APOA5Q6Q788 366 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 FAM178BQ8IXR5 827 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 FIBCD1Q8N539 461 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 BANK1Q8NDB2 785 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 CYP2W1Q8TAV3 490 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms