RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TEX33O43247 280 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 KRT18P05783 430 aaKnown RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 GSTA2P09210 222 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 TNNI2P48788 182 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 ITGB3BPQ13352 177 aaPredicted RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 DLGAP5Q15398 846 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 Q4G0T1 1027 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 CEP128Q6ZU80 1094 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 AMIGO3Q86WK7 504 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 IQCKQ8N0W5 287 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 VGLL2Q8N8G2 317 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 IFT81Q8WYA0 676 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 ATXN10Q9UBB4 475 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 TPD52L2O43399 206 aaKnown RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 ATP6V1G1O75348 118 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 FAM163BP0C2L3 166 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 NQO1P15559 274 aaKnown RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 PPP2R2AP63151 447 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 EXOSC10Q01780 885 aaKnown RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 LMNB2Q03252 620 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 ITIH4Q14624 930 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 AOC3Q16853 763 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 SGSM1Q2NKQ1 1148 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 LONRF3Q496Y0 759 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 CCDC92Q53HC0 331 aaPredicted RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 NIM1KQ8IY84 436 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 RNF10Q8N5U6 811 aaKnown RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 C17orf50Q8WW18 174 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 RMDN2Q96LZ7 410 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 CPVLQ9H3G5 476 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 NDST4Q9H3R1 872 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 TMCO1Q9UM00 188 aa8.54□□□□□ -1.04
SIK3-203ENST00000415541 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
SIK3-203ENST00000415541 RBM47A0AV96 593 aaKnown RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 CDC27P30260 824 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 DEUP1Q05D60 604 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 SPA17Q15506 151 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 MREGQ8N565 214 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.53□□□□□ -1.045e-8■■■■■ 65.3
SIK3-203ENST00000415541 CHMP6Q96FZ7 201 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 GBP5Q96PP8 586 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 COA1Q9GZY4 146 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 HPSEQ9Y251 543 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 RFX7Q2KHR2 1363 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 ZNF131P52739 623 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 NR5A1Q13285 461 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 PRKG1Q13976 671 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 SPATA4Q8NEY3 305 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 ZNF512BQ96KM6 892 aaPredicted RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 RAB3IPQ96QF0 476 aaPredicted RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 DMAP1Q9NPF5 467 aaPredicted RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 LUC7L2Q9Y383 392 aaKnown RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 KLRF2D3W0D1 207 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 E7ENQ6 273 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 CALML3P27482 149 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 ANTXR2P58335 489 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 SLC7A5Q01650 507 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 LETM2Q2VYF4 491 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 RESP18Q5W5W9 173 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 TMEM154Q6P9G4 183 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 ADGRA1Q86SQ6 560 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 METTL16Q86W50 562 aaKnown RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 TTLL6Q8N841 843 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 KLHL29Q96CT2 875 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 HINFPQ9BQA5 517 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 TMBIM4Q9HC24 238 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 PANK4Q9NVE7 773 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 ADD3Q9UEY8 706 aaKnown RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 PAIP2BQ9ULR5 123 aaKnown RBP8.53□□□□□ -1.04
SIK3-203ENST00000415541 HYOU1Q9Y4L1 999 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 SYNRGQ9UMZ2 1314 aa8.53□□□□□ -1.04
SIK3-203ENST00000415541 ZNF233A6NK53 670 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 PLEKHA8P1O95397 391 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 PRLRP16471 622 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 CCNG1P51959 295 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 ERVK-24P63145 666 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.04
SIK3-203ENST00000415541 CDC37Q16543 378 aaPredicted RBP8.52□□□□□ -1.04
SIK3-203ENST00000415541 ZNF662Q6ZS27 426 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 TMC4Q7Z404 712 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.04
SIK3-203ENST00000415541 ATL2Q8NHH9 583 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 IQCDQ96DY2 449 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 IWS1Q96ST2 819 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.52□□□□□ -1.04
SIK3-203ENST00000415541 RNF14Q9UBS8 474 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 POLLQ9UGP5 575 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 PLAAQ9Y263 795 aa8.52□□□□□ -1.04
SIK3-203ENST00000415541 ABCC6O95255 1503 aa8.52□□□□□ -1.05
SIK3-203ENST00000415541 BAZ2BQ9UIF8 2168 aaKnown RBP8.52□□□□□ -1.05
SIK3-203ENST00000415541 SMIM22K7EJ46 135 aa8.52□□□□□ -1.05
SIK3-203ENST00000415541 ORC4O43929 436 aa8.52□□□□□ -1.05
SIK3-203ENST00000415541 GYPCP04921 128 aa8.52□□□□□ -1.05
SIK3-203ENST00000415541 LIFRP42702 1097 aa8.52□□□□□ -1.05
SIK3-203ENST00000415541 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
SIK3-203ENST00000415541 FMR1Q06787 632 aaKnown RBP eCLIP8.52□□□□□ -1.052e-8■■■■■ 29.9
SIK3-203ENST00000415541 MTMR3Q13615 1198 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms