RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 COPB2P35606 906 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 IRX3P78415 501 aaPredicted RBP12.86□□□□□ -0.35
RFFL-205ENST00000415395 SPIRE1Q08AE8 756 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 SNAPC2Q13487 334 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 NR1I3Q14994 352 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 MAP1SQ66K74 1059 aaPredicted RBP12.86□□□□□ -0.35
RFFL-205ENST00000415395 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 MOB2Q70IA6 237 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 SLC5A5Q92911 643 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 MXRA8Q9BRK3 442 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 HOMER2Q9NSB8 354 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 INTS13Q9NVM9 706 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 COL20A1Q9P218 1284 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 FBXO40Q9UH90 709 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
RFFL-205ENST00000415395 CCDC151A5D8V7 595 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 EIF3JO75822 258 aaKnown RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 MUTP22033 750 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 CYP2C19P33261 490 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 SV2BQ7L1I2 683 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
RFFL-205ENST00000415395 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 GTF3C2Q8WUA4 911 aaPredicted RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 CCDC47Q96A33 483 aaKnown RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 SLC10A4Q96EP9 437 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 PNMA5Q96PV4 448 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 GBP3Q9H0R5 595 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 RRAGCQ9HB90 399 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 VAV3Q9UKW4 847 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 RIPK3Q9Y572 518 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 PSMD10O75832 226 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 RPN1P04843 607 aaKnown RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 BMP6P22004 513 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 OSBPP22059 807 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 PPP2R5CQ13362 524 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 CUL4BQ13620 913 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 MOGSQ13724 837 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 CC2D1AQ6P1N0 951 aaPredicted RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 SLC30A10Q6XR72 485 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 LARP4BQ92615 738 aaKnown RBP12.85□□□□□ -0.35
RFFL-205ENST00000415395 RAD54LQ92698 747 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 RIT2Q99578 217 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 UBIAD1Q9Y5Z9 338 aa12.85□□□□□ -0.35
RFFL-205ENST00000415395 LCTP09848 1927 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 STAM2O75886 525 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 RPA1P27694 616 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFFL-205ENST00000415395 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
RFFL-205ENST00000415395 PGM5Q15124 567 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
RFFL-205ENST00000415395 LRCH2Q5VUJ6 765 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 MSL3Q8N5Y2 521 aaKnown RBP12.84□□□□□ -0.35
RFFL-205ENST00000415395 CYP2W1Q8TAV3 490 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 POLR3CQ9BUI4 534 aaPredicted RBP12.84□□□□□ -0.35
RFFL-205ENST00000415395 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 ASCC2Q9H1I8 757 aaPredicted RBP12.84□□□□□ -0.35
RFFL-205ENST00000415395 ACBD3Q9H3P7 528 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 GBA2Q9HCG7 927 aaPredicted RBP12.84□□□□□ -0.35
RFFL-205ENST00000415395 JADE2Q9NQC1 790 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 BLOC1S4Q9NUP1 217 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 PFASO15067 1338 aa12.84□□□□□ -0.35
RFFL-205ENST00000415395 TRAF5O00463 557 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 RHOBTB3O94955 611 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 SLC25A27O95847 323 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 PPP1R2P41236 205 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 ADKP55263 362 aaKnown RBP12.83□□□□□ -0.36
RFFL-205ENST00000415395 HERVK_113P62684 666 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 TOGARAM2Q6ZUX3 1019 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 C2orf69Q8N8R5 385 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 LRRN4CLQ8ND94 238 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
RFFL-205ENST00000415395 LRRC15Q8TF66 581 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 HNRNPLLQ8WVV9 542 aaKnown RBP12.83□□□□□ -0.36
RFFL-205ENST00000415395 ZNF577Q9BSK1 485 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 BLZF1Q9H2G9 400 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 CYP39A1Q9NYL5 469 aa12.83□□□□□ -0.36
RFFL-205ENST00000415395 CWC15Q9P013 229 aaKnown RBP12.83□□□□□ -0.36
RFFL-205ENST00000415395 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms