RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PCDHB5Q9Y5E4 795 aa5.81□□□□□ -1.48
VPS41-205ENST00000414632 GPR25O00155 361 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 PDHXO00330 501 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 CA12O43570 354 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 PRDM1O75626 825 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 SMNDC1O75940 238 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS41-205ENST00000414632 F13A1P00488 732 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 ZFYP08048 801 aaPredicted RBP5.8□□□□□ -1.48
VPS41-205ENST00000414632 CYP2C8P10632 490 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 CETPP11597 493 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 GSPT1P15170 499 aaKnown RBP5.8□□□□□ -1.48
VPS41-205ENST00000414632 TDO2P48775 406 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 HMGCS2P54868 508 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 SPP2Q13103 211 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 MOGSQ13724 837 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 RAB33AQ14088 237 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 ABCB5Q2M3G0 1257 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 CERKLQ49MI3 558 aaPredicted RBP5.8□□□□□ -1.48
VPS41-205ENST00000414632 TREML2Q5T2D2 321 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 TTC22Q5TAA0 569 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 C12orf60Q5U649 245 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 RASIP1Q5U651 963 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 EGFLAMQ63HQ2 1017 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 CEP135Q66GS9 1140 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 GPAT2Q6NUI2 795 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 CTR9Q6PD62 1173 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 SYT9Q86SS6 491 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 ZNF589Q86UQ0 364 aaPredicted RBP5.8□□□□□ -1.48
VPS41-205ENST00000414632 JAZF1Q86VZ6 243 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 FOXP4Q8IVH2 680 aaPredicted RBP5.8□□□□□ -1.48
VPS41-205ENST00000414632 TRIM42Q8IWZ5 723 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 FBXO27Q8NI29 283 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 BSNDQ8WZ55 320 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 MKL1Q969V6 931 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 TRIM55Q9BYV6 548 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 CLEC4MQ9H2X3 399 aaPredicted RBP5.8□□□□□ -1.48
VPS41-205ENST00000414632 PRDM10Q9NQV6 1147 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 ATP8A2Q9NTI2 1148 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 SAGE1Q9NXZ1 904 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 SIRPGQ9P1W8 387 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 PRKAG3Q9UGI9 489 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 PPT2Q9UMR5 302 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 AFG3L2Q9Y4W6 797 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 SAMM50Q9Y512 469 aa5.8□□□□□ -1.48
VPS41-205ENST00000414632 HTTP42858 3142 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 CENPFP49454 3210 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 A0A0G2JLL6 359 aaPredicted RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 FOXP2O15409 715 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 PEX10O60683 326 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 CENPBP07199 599 aaPredicted RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 ASNSP08243 561 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 AKR1B1P15121 316 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 EIF2AK2P19525 551 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 SDSP20132 328 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 BMP6P22004 513 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 CDK8P49336 464 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 INHBEP58166 350 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 CAP1Q01518 475 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 GABPAQ06546 454 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 PCDH1Q08174 1060 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 SEPT2Q15019 361 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 ZNF423Q2M1K9 1284 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 LRRFIP1Q32MZ4 808 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 OTUD7BQ6GQQ9 843 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 TATDN1Q6P1N9 297 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 FOXR1Q6PIV2 292 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 TMED8Q6PL24 325 aaPredicted RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 CWC27Q6UX04 472 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 CCDC81Q6ZN84 652 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 PRRT2Q7Z6L0 340 aaPredicted RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 FAM35AQ86V20 835 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 AMOTL1Q8IY63 956 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 IFNL3Q8IZI9 196 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 CD99L2Q8TCZ2 262 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 ACER1Q8TDN7 264 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 HNRNPLLQ8WVV9 542 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 GATAD2BQ8WXI9 593 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 SHDQ96IW2 340 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 CCDC136Q96JN2 1154 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 TRERF1Q96PN7 1200 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 SRPK1Q96SB4 655 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 FEZ1Q99689 392 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 UBE2OQ9C0C9 1292 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 NAPBQ9H115 298 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 MIR1-1HGQ9H1L0 117 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 INCENPQ9NQS7 918 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 DIAPH3Q9NSV4 1193 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 ARPP21Q9UBL0 812 aaPredicted RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 CPA4Q9UI42 421 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS41-205ENST00000414632 R3HCC1Q9Y3T6 440 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 MRPL42Q9Y6G3 142 aaKnown RBP5.79□□□□□ -1.48
VPS41-205ENST00000414632 RLFQ13129 1914 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 DOCK3Q8IZD9 2030 aa5.79□□□□□ -1.48
VPS41-205ENST00000414632 PLXNB2O15031 1838 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 A0A0G2JMZ2 1700 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 FAM221AA4D161 298 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 C2CD2LO14523 706 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 CXCL11O14625 94 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 SMAD7O15105 426 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms