RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 RRAGDQ9NQL2 400 aaPredicted RBP16.36■□□□□ 0.21
RBBP4-204ENST00000414241 KCND2Q9NZV8 630 aa16.36■□□□□ 0.21
RBBP4-204ENST00000414241 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
RBBP4-204ENST00000414241 FRMD3A2A2Y4 597 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 SOCS7O14512 581 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 CHMP2AO43633 222 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 SLC25A27O95847 323 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 CYP4A11Q02928 519 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 COASYQ13057 564 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 LRRC8AQ8IWT6 810 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 TPH2Q8IWU9 490 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 RDM1Q8NG50 284 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
RBBP4-204ENST00000414241 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 ZNF830Q96NB3 372 aaPredicted RBP16.35■□□□□ 0.21
RBBP4-204ENST00000414241 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
RBBP4-204ENST00000414241 SLC39A2Q9NP94 309 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 RGL1Q9NZL6 768 aa16.35■□□□□ 0.21
RBBP4-204ENST00000414241 MAGEC2Q9UBF1 373 aaPredicted RBP16.35■□□□□ 0.21
RBBP4-204ENST00000414241 NRDCO43847 1150 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 P4HBP07237 508 aaKnown RBP16.34■□□□□ 0.21
RBBP4-204ENST00000414241 SFNP31947 248 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 JAK3P52333 1124 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 PSMC6P62333 389 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 HERVK_113P62684 666 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 KRT76Q01546 638 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 LRRC63Q05C16 580 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 ARSHQ5FYA8 562 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 TCP11X2Q5H9J9 407 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 FAM26FQ5R3K3 315 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 MIER3Q7Z3K6 550 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
RBBP4-204ENST00000414241 INPP4AQ96PE3 977 aaPredicted RBP16.34■□□□□ 0.21
RBBP4-204ENST00000414241 SPATC1LQ9H0A9 340 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 ADD3Q9UEY8 706 aaKnown RBP16.34■□□□□ 0.21
RBBP4-204ENST00000414241 RLFQ13129 1914 aa16.34■□□□□ 0.21
RBBP4-204ENST00000414241 POLR2AP24928 1970 aaKnown RBP16.34■□□□□ 0.21
RBBP4-204ENST00000414241 KCNJ18B7U540 433 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 ITGB3BPQ13352 177 aaPredicted RBP16.33■□□□□ 0.21
RBBP4-204ENST00000414241 GIT2Q14161 759 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 CTTNQ14247 550 aaKnown RBP16.33■□□□□ 0.21
RBBP4-204ENST00000414241 KCNJ12Q14500 433 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 HSP90AA4PQ58FG1 418 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 HERC4Q5GLZ8 1057 aaPredicted RBP16.33■□□□□ 0.21
RBBP4-204ENST00000414241 SPECC1LQ69YQ0 1117 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.33■□□□□ 0.21
RBBP4-204ENST00000414241 APTXQ7Z2E3 356 aaKnown RBP16.33■□□□□ 0.21
RBBP4-204ENST00000414241 MYOCDQ8IZQ8 938 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 ANKRD35Q8N283 1001 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 CSGALNACT2Q8N6G5 542 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 CACTINQ8WUQ7 758 aaKnown RBP16.33■□□□□ 0.21
RBBP4-204ENST00000414241 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 KCNF1Q9H3M0 494 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 ZSWIM4Q9H7M6 989 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 BTBD7Q9P203 1132 aa16.33■□□□□ 0.21
RBBP4-204ENST00000414241 TESPA1A2RU30 521 aaPredicted RBP16.33■□□□□ 0.2
RBBP4-204ENST00000414241 B4DLN1 442 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 LYPLA2O95372 231 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 MOGSQ13724 837 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 GNPTABQ3T906 1256 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 TSG101Q99816 390 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 SENP7Q9BQF6 1050 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 SRRTQ9BXP5 876 aaKnown RBP16.33■□□□□ 0.2
RBBP4-204ENST00000414241 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
RBBP4-204ENST00000414241 INTS13Q9NVM9 706 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 PNMA3Q9UL41 463 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 COL4A3BPQ9Y5P4 624 aa16.33■□□□□ 0.2
RBBP4-204ENST00000414241 PARP14Q460N5 1801 aa16.32■□□□□ 0.2
RBBP4-204ENST00000414241 GAP43P17677 238 aa16.32■□□□□ 0.2
RBBP4-204ENST00000414241 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.2
RBBP4-204ENST00000414241 PMS1P54277 932 aaKnown RBP16.32■□□□□ 0.2
RBBP4-204ENST00000414241 MAP1SQ66K74 1059 aaPredicted RBP16.32■□□□□ 0.2
RBBP4-204ENST00000414241 ZNF746Q6NUN9 644 aaPredicted RBP16.32■□□□□ 0.2
RBBP4-204ENST00000414241 DUSP9Q99956 384 aaKnown RBP16.32■□□□□ 0.2
RBBP4-204ENST00000414241 SLC45A1Q9Y2W3 748 aa16.32■□□□□ 0.2
RBBP4-204ENST00000414241 PCDHA2Q9Y5H9 948 aa16.32■□□□□ 0.2
RBBP4-204ENST00000414241 SMCHD1A6NHR9 2005 aa16.32■□□□□ 0.2
RBBP4-204ENST00000414241 TRIM49BA6NDI0 452 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 WDR64B1ANS9 1081 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
RBBP4-204ENST00000414241 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
RBBP4-204ENST00000414241 TPM2P07951 284 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 QARSP47897 775 aaKnown RBP16.31■□□□□ 0.2
RBBP4-204ENST00000414241 KRT31Q15323 416 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 STXBP2Q15833 593 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 KIAA1524Q8TCG1 905 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
RBBP4-204ENST00000414241 LXNQ9BS40 222 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 SEMA6BQ9H3T3 888 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 DBR1Q9UK59 544 aaKnown RBP16.31■□□□□ 0.2
RBBP4-204ENST00000414241 NFASCO94856 1347 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 N4BP3O15049 544 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
RBBP4-204ENST00000414241 COPB1P53618 953 aaKnown RBP16.31■□□□□ 0.2
RBBP4-204ENST00000414241 C1orf186Q6ZWK4 172 aa16.31■□□□□ 0.2
RBBP4-204ENST00000414241 IRF2BP1Q8IU81 584 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms