RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RABL6Q3YEC7 729 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 ANKRD39Q53RE8 183 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 CCDC178Q5BJE1 867 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 RILPL1Q5EBL4 403 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 ANGEL2Q5VTE6 544 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 AP1ARQ63HQ0 302 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 C1orf122Q6ZSJ8 110 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 C16orf86Q6ZW13 317 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 RSRC2Q7L4I2 434 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 UBE3DQ7Z6J8 389 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 SPATS2Q86XZ4 545 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 SULF2Q8IWU5 870 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 RBM12BQ8IXT5 1001 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TCEAL8Q8IYN2 117 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 THEMISQ8N1K5 641 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 DRAXINQ8NBI3 349 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 KCT2Q8NC54 265 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 GRIN3AQ8TCU5 1115 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 DDX54Q8TDD1 881 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 SNX21Q969T3 373 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 JAKMIP2Q96AA8 810 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 HRASLS5Q96KN8 279 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 NECAB3Q96P71 396 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 NEK1Q96PY6 1258 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 DEPDC7Q96QD5 511 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 STRBPQ96SI9 672 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TACO1Q9BSH4 297 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 FAM126AQ9BYI3 521 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 SLC7A5P2Q9GIP4 190 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 ZNF304Q9HCX3 659 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TMEM39AQ9NV64 488 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TMEM260Q9NX78 707 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 SAGE1Q9NXZ1 904 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 ZIM2Q9NZV7 527 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 GTF2IRD1Q9UHL9 959 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 HERC5Q9UII4 1024 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 NOSIPQ9Y314 301 aaKnown RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 MAGED1Q9Y5V3 778 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-203ENST00000414174 SNCAIPQ9Y6H5 919 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 DGKBQ9Y6T7 804 aa4.14□□□□□ -1.75
SF3B1-203ENST00000414174 TMEM265A0A087WTH1 108 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 FAM221BA6H8Z2 402 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 RASSF10A6NK89 507 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 RBAK-RBAKDNI3L0D1 243 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 M0QX08 132 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 SPTLC2O15270 562 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 AKAP10O43572 662 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 PLOD3O60568 738 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 FBXO24O75426 580 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 LEFTY1O75610 366 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 RASGRP1O95267 797 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 CD9P21926 228 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 BMP6P22004 513 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 GUCY2CP25092 1073 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 CD96P40200 585 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 NEK3P51956 506 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 ZBTB17Q13105 803 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 PRKG2Q13237 762 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 PICALMQ13492 652 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 SF3B3Q15393 1217 aaKnown RBP4.13□□□□□ -1.75
SF3B1-203ENST00000414174 CNGA3Q16281 694 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 CFAP58Q5T655 872 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 PACS1Q6VY07 963 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 TOGARAM2Q6ZUX3 1019 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 BRINP3Q76B58 766 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 RUFY3Q7L099 469 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 DDX42Q86XP3 938 aaKnown RBP eCLIP4.13□□□□□ -1.75
SF3B1-203ENST00000414174 GPBAR1Q8TDU6 330 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 ATP6V1E2Q96A05 226 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 RSRC1Q96IZ7 334 aaKnown RBP4.13□□□□□ -1.75
SF3B1-203ENST00000414174 DHRS1Q96LJ7 313 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 C1orf74Q96LT6 269 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 SLC26A8Q96RN1 970 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 NOL10Q9BSC4 688 aaKnown RBP4.13□□□□□ -1.75
SF3B1-203ENST00000414174 NACA2Q9H009 215 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 CCDC113Q9H0I3 377 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 CDH19Q9H159 772 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 ATP8A2Q9NTI2 1148 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 RNF19AQ9NV58 838 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 PSD3Q9NYI0 1048 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 SEPT10Q9P0V9 454 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 ARHGAP28Q9P2N2 729 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 VTI1BQ9UEU0 232 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 TMEM98Q9Y2Y6 226 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 LUC7L2Q9Y383 392 aaKnown RBP4.13□□□□□ -1.75
SF3B1-203ENST00000414174 SNX11Q9Y5W9 270 aa4.13□□□□□ -1.75
SF3B1-203ENST00000414174 LRRFIP2Q9Y608 721 aaKnown RBP4.13□□□□□ -1.75
SF3B1-203ENST00000414174 AKNAQ7Z591 1439 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TBKBP1A7MCY6 615 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 J3KRW8 73 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 MYO1BO43795 1136 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 KPNA6O60684 536 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 NBNO60934 754 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 CDKL5O76039 1030 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 AGR2O95994 175 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 GLI1P08151 1106 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 CELA3AP09093 270 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 FAM87AP0C7U9 286 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TSPY4P0CV99 314 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TSPY10P0CW01 314 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms