RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 MRPS9P82933 396 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 SP2Q02086 613 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 METTL7BQ6UX53 244 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 TEX2Q8IWB9 1127 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 GIMAP8Q8ND71 665 aaPredicted RBP19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 FBXO18Q8NFZ0 1043 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 PHOSPHO2Q8TCD6 241 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 CDHR1Q96JP9 859 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 SLC9A7Q96T83 725 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 RTEL1Q9NZ71 1219 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 PCDHA11Q9Y5I1 949 aa19.26■□□□□ 0.67
SCAMP4-204ENST00000414057 SPDYE3A6NKU9 549 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 BAIAP3O94812 1187 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 RBL2Q08999 1139 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 FUT2Q10981 343 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 PTK7Q13308 1070 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 CCDC82Q8N4S0 544 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 PHKBQ93100 1093 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 ZFP91Q96JP5 570 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 SENP7Q9BQF6 1050 aa19.25■□□□□ 0.67
SCAMP4-204ENST00000414057 H3BRB1 525 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 SORBS3O60504 671 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 XBP1P17861 261 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 TRIM29Q14134 588 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 LRRC8DQ7L1W4 858 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 VWCEQ96DN2 955 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 C16orf70Q9BSU1 422 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 TUT1Q9H6E5 874 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 EHMT1Q9H9B1 1298 aa19.24■□□□□ 0.67
SCAMP4-204ENST00000414057 KIF28PB7ZC32 967 aa19.23■□□□□ 0.67
SCAMP4-204ENST00000414057 FOXD4L5Q5VV16 416 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-204ENST00000414057 CYFIP1Q7L576 1253 aa19.23■□□□□ 0.67
SCAMP4-204ENST00000414057 FOXD4L4Q8WXT5 416 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-204ENST00000414057 NKX2-4Q9H2Z4 354 aa19.23■□□□□ 0.67
SCAMP4-204ENST00000414057 CNTNAP5Q8WYK1 1306 aa19.23■□□□□ 0.67
SCAMP4-204ENST00000414057 MAFGO15525 162 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 DTNBO60941 627 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 CKBP12277 381 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 KCNJ6P48051 423 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 PPP2R2DQ66LE6 453 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 HEATR3Q7Z4Q2 680 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 GPKOWQ92917 476 aaPredicted RBP eCLIP19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 GPRASP2Q96D09 838 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 ZNF215Q9UL58 517 aaPredicted RBP19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 BAZ2BQ9UIF8 2168 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 C17orf102A2RUQ5 167 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 hCG_1984214I3L0E3 225 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 LGALS2P05162 132 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 GNAT1P11488 350 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 CSPP1Q1MSJ5 1256 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 ATL3Q6DD88 541 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 ZNF713Q8N859 430 aaPredicted RBP19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 CTAGE1Q96RT6 745 aa19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 YBX2Q9Y2T7 364 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-204ENST00000414057 EFCAB14O75071 495 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 RABGGTBP53611 331 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 RESTQ13127 1097 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 PPP1R18Q6NYC8 613 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 CNKSR3Q6P9H4 555 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 BRAPQ7Z569 592 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 DHX38Q92620 1227 aaKnown RBP19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 GLT8D2Q9H1C3 349 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 PRDM12Q9H4Q4 367 aa19.21■□□□□ 0.67
SCAMP4-204ENST00000414057 hCG_1642624A0A1W2PR95 340 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 PPFIA3O75145 1194 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 NAPAP54920 295 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 MCTP1Q6DN14 999 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 ATP6V0A1Q93050 837 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 GPR20Q99678 358 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 PCDHA6Q9UN73 950 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 PCDHA8Q9Y5H6 950 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 EMSYQ7Z589 1322 aa19.2■□□□□ 0.66
SCAMP4-204ENST00000414057 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 ABHD14A-ACY1A0A1B0GW23 586 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 CXCL10P02778 98 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 KRT85P78386 507 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 SEMA3FQ13275 785 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 MTMR1Q13613 665 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 NBR1Q14596 966 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 SAFBQ15424 915 aaKnown RBP eCLIP19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 KRT40Q6A162 431 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 FERMT3Q86UX7 667 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 SERINC5Q86VE9 423 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 HERC6Q8IVU3 1022 aa19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-204ENST00000414057 CAND2O75155 1236 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 FOSP01100 380 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 SMIM10L2AP0DMW4 78 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 SMIM10L2BP0DMW5 78 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 IKBKEQ14164 716 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 PKN1Q16512 942 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 UBE2SQ16763 222 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 PFKFB3Q16875 520 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 SKOR2Q2VWA4 1001 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 ZNF618Q5T7W0 954 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 TMEM87AQ8NBN3 555 aa19.18■□□□□ 0.66
SCAMP4-204ENST00000414057 SH3GLB2Q9NR46 395 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms