RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 TNPO1Q92973 898 aaKnown RBP19.15■□□□□ 0.66
SF1-207ENST00000413951 GPRASP2Q96D09 838 aa19.15■□□□□ 0.66
SF1-207ENST00000413951 NRCAMQ92823 1304 aa19.15■□□□□ 0.66
SF1-207ENST00000413951 TRIP12Q14669 1992 aaPredicted RBP19.15■□□□□ 0.66
SF1-207ENST00000413951 EPOPA6NHQ4 379 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 SPDYE3A6NKU9 549 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 RCAN1P53805 252 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 TOB2Q14106 344 aaPredicted RBP19.14■□□□□ 0.65
SF1-207ENST00000413951 TAF2Q6P1X5 1199 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 APOA5Q6Q788 366 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 USP17L6PQ6QN14 398 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 Q6ZUG5 572 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 RSPH3Q86UC2 560 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 MYOCDQ8IZQ8 938 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 WNT8BQ93098 351 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 ZFP91Q96JP5 570 aaPredicted RBP19.14■□□□□ 0.65
SF1-207ENST00000413951 NID2Q14112 1375 aa19.14■□□□□ 0.65
SF1-207ENST00000413951 LCHNA4D1U4 455 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 LINC01553A4QN01 128 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 MEIS2O14770 477 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 TREHO43280 583 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 MBTPS1Q14703 1052 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 PTPROQ16827 1216 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 BRPF3Q9ULD4 1205 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 MYH7BA7E2Y1 1941 aa19.13■□□□□ 0.65
SF1-207ENST00000413951 TET1Q8NFU7 2136 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 LPXNO60711 386 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 ARHGEF15O94989 841 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 TFF2Q03403 129 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 HIC1Q14526 733 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 UTP14CQ5TAP6 766 aaKnown RBP19.12■□□□□ 0.65
SF1-207ENST00000413951 SEPT1Q8WYJ6 367 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 BRF1Q92994 677 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 MYL10Q9BUA6 226 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 C1QTNF1Q9BXJ1 281 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 SUGCTQ9HAC7 445 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 PDRG1Q9NUG6 133 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 SETD4Q9NVD3 440 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 ERAP1Q9NZ08 941 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 CHD7Q9P2D1 2997 aa19.12■□□□□ 0.65
SF1-207ENST00000413951 HTRA4P83105 476 aaPredicted RBP19.11■□□□□ 0.65
SF1-207ENST00000413951 ARHGAP4P98171 946 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 SEMA3FQ13275 785 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 MTMR1Q13613 665 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 FAM117BQ6P1L5 589 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.11■□□□□ 0.655e-14■■□□□ 13
SF1-207ENST00000413951 TMCO2Q7Z6W1 182 aaPredicted RBP19.11■□□□□ 0.65
SF1-207ENST00000413951 RPAINQ86UA6 219 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 SRBD1Q8N5C6 995 aaKnown RBP19.11■□□□□ 0.65
SF1-207ENST00000413951 FANCBQ8NB91 859 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 FBXO22Q8NEZ5 403 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 TOP1MTQ969P6 601 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 YME1L1Q96TA2 773 aa19.11■□□□□ 0.65
SF1-207ENST00000413951 RBM28Q9NW13 759 aaKnown RBP19.11■□□□□ 0.65
SF1-207ENST00000413951 TCF7P36402 384 aaPredicted RBP19.1■□□□□ 0.65
SF1-207ENST00000413951 FGD1P98174 961 aa19.1■□□□□ 0.65
SF1-207ENST00000413951 FAM26DQ5JW98 314 aa19.1■□□□□ 0.65
SF1-207ENST00000413951 SP7Q8TDD2 431 aaPredicted RBP19.1■□□□□ 0.65
SF1-207ENST00000413951 GDPD5Q8WTR4 605 aa19.1■□□□□ 0.65
SF1-207ENST00000413951 SMARCAD1Q9H4L7 1026 aa19.1■□□□□ 0.65
SF1-207ENST00000413951 MTUS1Q9ULD2 1270 aa19.1■□□□□ 0.65
SF1-207ENST00000413951 KLF18A0A0U1RQI7 1052 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 PLEKHA8P1O95397 391 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 CTSHP09668 335 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 KCNQ1P51787 676 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 SP4Q02446 784 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 APOBRQ0VD83 1088 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 MKRN4PQ13434 485 aaPredicted RBP19.09■□□□□ 0.65
SF1-207ENST00000413951 TCTN1Q2MV58 587 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 KRT40Q6A162 431 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 TMTC3Q6ZXV5 915 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 LMBR1Q8WVP7 490 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 GLG1Q92896 1179 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 IFIH1Q9BYX4 1025 aaKnown RBP19.09■□□□□ 0.65
SF1-207ENST00000413951 GLT8D2Q9H1C3 349 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 BCAS3Q9H6U6 928 aa19.09■□□□□ 0.65
SF1-207ENST00000413951 BAZ2BQ9UIF8 2168 aaKnown RBP19.09■□□□□ 0.65
SF1-207ENST00000413951 PRRC2BQ5JSZ5 2229 aaKnown RBP19.08■□□□□ 0.65
SF1-207ENST00000413951 hCG_1984214I3L0E3 225 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 ZBTB43O43298 467 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 FOSP01100 380 aaPredicted RBP19.08■□□□□ 0.64
SF1-207ENST00000413951 KCNA2P16389 499 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 NEK4P51957 841 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 ADAM17P78536 824 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 PPFIA1Q13136 1202 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 RABEP1Q15276 862 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 FAM43BQ6ZT52 329 aaPredicted RBP19.08■□□□□ 0.64
SF1-207ENST00000413951 HEATR3Q7Z4Q2 680 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 MICU3Q86XE3 530 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 TRIM50Q86XT4 487 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 ZNF713Q8N859 430 aaPredicted RBP19.08■□□□□ 0.64
SF1-207ENST00000413951 AZI2Q9H6S1 392 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 JADE2Q9NQC1 790 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 PCDHA6Q9UN73 950 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 RWDD3Q9Y3V2 267 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 PCDHA8Q9Y5H6 950 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 UBIAD1Q9Y5Z9 338 aa19.08■□□□□ 0.64
SF1-207ENST00000413951 RRN3P2A6NIE6 340 aa19.07■□□□□ 0.64
SF1-207ENST00000413951 ITGB5P18084 799 aa19.07■□□□□ 0.64
SF1-207ENST00000413951 COL9A1P20849 921 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms