RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	HSDL1	Q3SXM5	330 aa		11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	DHX37	Q8IY37	1157 aa	Known RBP	11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	OR6J1	Q8NGC5	347 aa		11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	PPTC7	Q8NI37	304 aa		11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	SP7	Q8TDD2	431 aa	Predicted RBP	11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	FAM20A	Q96MK3	541 aa		11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	RIT2	Q99578	217 aa		11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	ZNF577	Q9BSK1	485 aa		11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ZNF3-205	ENST00000413658	STK25	O00506	426 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	GALR2	O43603	387 aa	Predicted RBP	11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	CCNE2	O96020	404 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	SPIRE1	Q08AE8	756 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	CALCRL	Q16602	461 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	FSCN1	Q16658	493 aa	Known RBP	11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	TNS4	Q8IZW8	715 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	AFG1L	Q8WV93	481 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	SPATA33	Q96N06	139 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	TBC1D22B	Q9NU19	505 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	VAV3	Q9UKW4	847 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	CLIC4	Q9Y696	253 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	KAT6A	Q92794	2004 aa		11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	TRIP12	Q14669	1992 aa	Predicted RBP	11.62	□□□□□ -0.55
ZNF3-205	ENST00000413658	GSTTP1	A0A1W2PQM5	241 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	ATG7	O95352	703 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	MMP3	P08254	477 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	C6orf222	P0C671	652 aa	Predicted RBP	11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	ATP2C1	P98194	919 aa	Predicted RBP	11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	BEX3	Q00994	111 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	PTGDR	Q13258	359 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	PTPA	Q15257	358 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	IL17A	Q16552	155 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	LRCH2	Q5VUJ6	765 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	HS6ST3	Q8IZP7	471 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	USP28	Q96RU2	1077 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	GPR20	Q99678	358 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	SDF4	Q9BRK5	362 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	TMEM106C	Q9BVX2	250 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	AP5M1	Q9H0R1	490 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	UNC45A	Q9H3U1	944 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	MLXIP	Q9HAP2	919 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	JPH1	Q9HDC5	661 aa	Predicted RBP	11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	SLC9A2	Q9UBY0	812 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	ALPK3	Q96L96	1907 aa		11.61	□□□□□ -0.55
ZNF3-205	ENST00000413658	DDX39A	O00148	427 aa	Known RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	GAS7	O60861	476 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	GABBR2	O75899	941 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	OR52Z1	P0C646	297 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	CPT1A	P50416	773 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	ACTR2	P61160	394 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	NUCB2	P80303	420 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	PPP2R5C	Q13362	524 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	SF3A1	Q15459	793 aa	Known RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	KCNA10	Q16322	511 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	GNAS	Q5JWF2	1037 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	ABHD15	Q6UXT9	468 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	UBE2Q1	Q7Z7E8	422 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	SLFN12	Q8IYM2	578 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	CHAMP1	Q96JM3	812 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	ELP1	O95163	1332 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	IGKV6D-21	A0A0A0MT36	114 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	EML1	O00423	815 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	DNM1L	O00429	736 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	LAD1	O00515	517 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	PPFIA4	O75335	1185 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	TFRC	P02786	760 aa	Known RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	CAPN2	P17655	700 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	EN2	P19622	333 aa	Predicted RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	PRPH	P41219	470 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	NASP	P49321	788 aa	Predicted RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	PURA	Q00577	322 aa	Known RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	KRT76	Q01546	638 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	SP4	Q02446	784 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	RNF180	Q86T96	592 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	ARRDC4	Q8NCT1	418 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	PCYT2	Q99447	389 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	TSEN34	Q9BSV6	310 aa	Known RBP	11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	TEKT3	Q9BXF9	490 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	SPC25	Q9HBM1	224 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	POLR3E	Q9NVU0	708 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	PHF24	Q9UPV7	400 aa		11.6	□□□□□ -0.55
ZNF3-205	ENST00000413658	LGR5	O75473	907 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	BAG4	O95429	457 aa	Known RBP	11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	ASGR1	P07306	291 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	COL6A1	P12109	1028 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	TXK	P42681	527 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	ACLY	P53396	1101 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	DNM1	Q05193	864 aa	Known RBP	11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	SLC39A14	Q15043	492 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	DGKD	Q16760	1214 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	ANKLE1	Q8NAG6	615 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	DIS3L	Q8TF46	1054 aa	Known RBP	11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	SEPT1	Q8WYJ6	367 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	KAT2B	Q92831	832 aa		11.59	□□□□□ -0.55
ZNF3-205	ENST00000413658	C16orf70	Q9BSU1	422 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms