RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 ARSHQ5FYA8 562 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 LUC7LQ9NQ29 371 aaKnown RBP16.49■□□□□ 0.23
TTC39A-208ENST00000413473 PCDHA1Q9Y5I3 950 aa16.49■□□□□ 0.23
TTC39A-208ENST00000413473 SKIDA1Q1XH10 827 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 EMBQ6PCB8 327 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 TSEN2Q8NCE0 465 aaKnown RBP16.48■□□□□ 0.23
TTC39A-208ENST00000413473 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 USP21Q9UK80 565 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 EPS15P42566 896 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 KLHL30Q0D2K2 578 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 KIAA0753Q2KHM9 967 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 CDC42EP5Q6NZY7 148 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 NAP1L4Q99733 375 aaKnown RBP16.48■□□□□ 0.23
TTC39A-208ENST00000413473 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
TTC39A-208ENST00000413473 POTEFA5A3E0 1075 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 CETN3O15182 167 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 PPFIA4O75335 1185 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 POTEIP0CG38 1075 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 USP11P51784 963 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 KCNH2Q12809 1159 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 NFIAQ12857 509 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 POTEGQ6S5H5 508 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 ANO3Q9BYT9 981 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 AIPL1Q9NZN9 384 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 RNF14Q9UBS8 474 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 PACSIN2Q9UNF0 486 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-208ENST00000413473 SUGT1Q9Y2Z0 365 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 GLI1P08151 1106 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 SLC12A3P55017 1021 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 GLE1Q53GS7 698 aaKnown RBP16.47■□□□□ 0.23
TTC39A-208ENST00000413473 RASSF4Q9H2L5 321 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 MYO3BQ8WXR4 1341 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 LY75O60449 1722 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 NR2F2P24468 414 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 CASP5P51878 434 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
TTC39A-208ENST00000413473 DDR1Q08345 913 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 DOK7Q18PE1 504 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 ZFPM1Q8IX07 1006 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 SP8Q8IXZ3 490 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 SH3GL2Q99962 352 aa16.47■□□□□ 0.23
TTC39A-208ENST00000413473 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
TTC39A-208ENST00000413473 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
TTC39A-208ENST00000413473 MYH4Q9Y623 1939 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 ARFGEF1Q9Y6D6 1849 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 PPEF1O14829 653 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-208ENST00000413473 SHOX2O60902 331 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-208ENST00000413473 ACTN1P12814 892 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 PSMC6P62333 389 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 ASIC2Q16515 512 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 CATSPER3Q86XQ3 398 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 GANQ9H2C0 597 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 PCDHGC5Q9Y5F6 944 aa16.46■□□□□ 0.23
TTC39A-208ENST00000413473 CYP3A7-CYP3A51PA0A087WV96 503 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 FRMD3A2A2Y4 597 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 CYP3A7P24462 503 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 TNFRSF8P28908 595 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 CARSP49589 748 aaKnown RBP16.46■□□□□ 0.22
TTC39A-208ENST00000413473 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.22
TTC39A-208ENST00000413473 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 APOBEC3HQ6NTF7 200 aaKnown RBP16.46■□□□□ 0.22
TTC39A-208ENST00000413473 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.22
TTC39A-208ENST00000413473 IFT20Q8IY31 132 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 CAVIN3Q969G5 261 aa16.46■□□□□ 0.22
TTC39A-208ENST00000413473 PITPNM2Q9BZ72 1349 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 ESYT3A0FGR9 886 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 ZSCAN5CA6NGD5 496 aaPredicted RBP16.45■□□□□ 0.22
TTC39A-208ENST00000413473 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 MEIS1O00470 390 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 OPA1O60313 960 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 TOM1O60784 492 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 SLC9A1P19634 815 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 IRAK1P51617 712 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 PRR16Q569H4 304 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 ALS2CLQ60I27 953 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 IFT81Q8WYA0 676 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 P2RX7Q99572 595 aaKnown RBP16.45■□□□□ 0.22
TTC39A-208ENST00000413473 EPB41L5Q9HCM4 733 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 NFU1Q9UMS0 254 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 LTBP4Q8N2S1 1624 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 GOLGA8KD6RF30 607 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 ANKRD65E5RJM6 399 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 MEIS2O14770 477 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
TTC39A-208ENST00000413473 GUCY2DQ02846 1103 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 PPFIA1Q13136 1202 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 PABPC4Q13310 644 aaKnown RBP eCLIP16.45■□□□□ 0.22
TTC39A-208ENST00000413473 CDC37Q16543 378 aaPredicted RBP16.45■□□□□ 0.22
TTC39A-208ENST00000413473 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 SLFN12Q8IYM2 578 aa16.45■□□□□ 0.22
TTC39A-208ENST00000413473 ARL8AQ96BM9 186 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms