RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 KATNAL1Q9BW62 490 aa14.96□□□□□ -0.01
SSB-203ENST00000413002 DOCK5Q9H7D0 1870 aa14.96□□□□□ -0.01
SSB-203ENST00000413002 JPH1Q9HDC5 661 aaPredicted RBP14.96□□□□□ -0.01
SSB-203ENST00000413002 GTF2IRD1Q9UHL9 959 aa14.96□□□□□ -0.01
SSB-203ENST00000413002 A0A1W2PPC1 479 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 M0R2N6 131 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 SMIM10L2AP0DMW4 78 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 SMIM10L2BP0DMW5 78 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 TMEM199Q8N511 208 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 DHX38Q92620 1227 aaKnown RBP14.95□□□□□ -0.02
SSB-203ENST00000413002 WNT8BQ93098 351 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 GJA10Q969M2 543 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.95□□□□□ -0.024e-8■■■■■ 28.7
SSB-203ENST00000413002 SDF4Q9BRK5 362 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 RNPEPQ9H4A4 650 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 SETD4Q9NVD3 440 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 SLC9A2Q9UBY0 812 aa14.95□□□□□ -0.02
SSB-203ENST00000413002 CCNE2O96020 404 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 ACTR2P61160 394 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 MCTP2Q6DN12 878 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 DEFB128Q7Z7B8 93 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 SESTD1Q86VW0 696 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 DAGLBQ8NCG7 672 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 GLG1Q92896 1179 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 PCYT2Q99447 389 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 ZNF577Q9BSK1 485 aa14.94□□□□□ -0.02
SSB-203ENST00000413002 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
SSB-203ENST00000413002 LAMA3Q16787 3333 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 C17orf102A2RUQ5 167 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 FAM205CA6NFA0 338 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 IPO5O00410 1097 aaKnown RBP14.93□□□□□ -0.02
SSB-203ENST00000413002 DHX15O43143 795 aaKnown RBP14.93□□□□□ -0.02
SSB-203ENST00000413002 TDP2O95551 362 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 PPIGQ13427 754 aaKnown RBP eCLIP14.93□□□□□ -0.022e-8■□□□□ 9.4
SSB-203ENST00000413002 INF2Q27J81 1249 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 EARS2Q5JPH6 523 aaKnown RBP14.93□□□□□ -0.02
SSB-203ENST00000413002 TMEM240Q5SV17 173 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 ZNF365Q70YC5 407 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 NIPA1Q7RTP0 329 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 LENG9Q96B70 501 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 VWCEQ96DN2 955 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 ZBTB10Q96DT7 871 aa14.93□□□□□ -0.02
SSB-203ENST00000413002 RNPC3Q96LT9 517 aaKnown RBP14.93□□□□□ -0.02
SSB-203ENST00000413002 NFASCO94856 1347 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 TREHO43280 583 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 CD2BP2O95400 341 aaKnown RBP14.92□□□□□ -0.02
SSB-203ENST00000413002 XBP1P17861 261 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 CIITAP33076 1130 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 GUCY1B3Q02153 619 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 NR5A1Q13285 461 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 NONOQ15233 471 aaKnown RBP eCLIP14.92□□□□□ -0.02
SSB-203ENST00000413002 RABEP1Q15276 862 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 LRIT3Q3SXY7 679 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 GALNT17Q6IS24 598 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 PIK3AP1Q6ZUJ8 805 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 RETREG2Q8NC44 543 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 WASF1Q92558 559 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 ATP6V0A1Q93050 837 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 TBC1D32Q96NH3 1257 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 IL23AQ9NPF7 189 aa14.92□□□□□ -0.02
SSB-203ENST00000413002 ZNF215Q9UL58 517 aaPredicted RBP14.92□□□□□ -0.02
SSB-203ENST00000413002 CCDC194A0A1B0GVG4 234 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 MSH4O15457 936 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 IQCF3P0C7M6 154 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 USP11P51784 963 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 IGBP1P78318 339 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 PTK7Q13308 1070 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 BFSP2Q13515 415 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 LETM2Q2VYF4 491 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 FAM109BQ6ICB4 259 aaPredicted RBP14.91□□□□□ -0.02
SSB-203ENST00000413002 OTOP2Q7RTS6 562 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 TRMT1LQ7Z2T5 733 aaKnown RBP14.91□□□□□ -0.02
SSB-203ENST00000413002 KRT25Q7Z3Z0 450 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 LMBR1Q8WVP7 490 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 ZSCAN31Q96LW9 406 aaPredicted RBP14.91□□□□□ -0.02
SSB-203ENST00000413002 SMARCAD1Q9H4L7 1026 aa14.91□□□□□ -0.02
SSB-203ENST00000413002 LAMA2P24043 3122 aaKnown RBP14.91□□□□□ -0.02
SSB-203ENST00000413002 GRXCR1A8MXD5 290 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 BACH1O14867 736 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 CHMP2AO43633 222 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 LGR5O75473 907 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 FGBP02675 491 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 CKBP12277 381 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 SETQ01105 290 aaPredicted RBP14.9□□□□□ -0.02
SSB-203ENST00000413002 TRIM71Q2Q1W2 868 aaKnown RBP14.9□□□□□ -0.02
SSB-203ENST00000413002 ZNF618Q5T7W0 954 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 KRT40Q6A162 431 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 TRAPPC12Q8WVT3 735 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 BACH2Q9BYV9 841 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 AZI2Q9H6S1 392 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 ERAP1Q9NZ08 941 aa14.9□□□□□ -0.02
SSB-203ENST00000413002 CXXC1Q9P0U4 656 aaPredicted RBP14.9□□□□□ -0.02
SSB-203ENST00000413002 SZT2Q5T011 3432 aa14.89□□□□□ -0.03
SSB-203ENST00000413002 BTBD18B2RXH4 712 aa14.89□□□□□ -0.03
SSB-203ENST00000413002 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
SSB-203ENST00000413002 SLC37A4O43826 429 aa14.89□□□□□ -0.03
SSB-203ENST00000413002 ST18O60284 1047 aa14.89□□□□□ -0.03
SSB-203ENST00000413002 ATG7O95352 703 aa14.89□□□□□ -0.03
SSB-203ENST00000413002 CTSHP09668 335 aa14.89□□□□□ -0.03
SSB-203ENST00000413002 SELPP16109 830 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms