RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 PHKBQ93100 1093 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 CDHR1Q96JP9 859 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 ZBED2Q9BTP6 218 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 ANO3Q9BYT9 981 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 NCOA5Q9HCD5 579 aaKnown RBP13.27□□□□□ -0.29
LINC00963-201ENST00000412141 JADE2Q9NQC1 790 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 PRDM6Q9NQX0 595 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 BARHL2Q9NY43 387 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 ZNF215Q9UL58 517 aaPredicted RBP13.27□□□□□ -0.29
LINC00963-201ENST00000412141 TTC28Q96AY4 2481 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 GSTTP1A0A1W2PQM5 241 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 XIRP2A4UGR9 3374 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 KIF28PB7ZC32 967 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 ADAMTS3O15072 1205 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 ARHGEF15O94989 841 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 ARP10275 920 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 PSMA5P28066 241 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
LINC00963-201ENST00000412141 IGBP1P78318 339 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 CNKSR3Q6P9H4 555 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 GIMAP8Q8ND71 665 aaPredicted RBP13.26□□□□□ -0.29
LINC00963-201ENST00000412141 SEPT1Q8WYJ6 367 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 SLC9A7Q96T83 725 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 MXRA8Q9BRK3 442 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 OSBPL7Q9BZF2 842 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 KCNH7Q9NS40 1196 aa13.26□□□□□ -0.29
LINC00963-201ENST00000412141 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 DDX39AO00148 427 aaKnown RBP13.25□□□□□ -0.29
LINC00963-201ENST00000412141 TLL1O43897 1013 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 GNAT1P11488 350 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 SCG2P13521 617 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
LINC00963-201ENST00000412141 RBL2Q08999 1139 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 IKBKEQ14164 716 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 SPRED2Q7Z698 418 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 DBF4BQ8NFT6 615 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 LMBR1Q8WVP7 490 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 ZBTB10Q96DT7 871 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 UPF3BQ9BZI7 483 aaKnown RBP13.25□□□□□ -0.29
LINC00963-201ENST00000412141 GBF1Q92538 1859 aa13.25□□□□□ -0.29
LINC00963-201ENST00000412141 LCHNA4D1U4 455 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 LGR5O75473 907 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 BAIAP3O94812 1187 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 FOSP01100 380 aaPredicted RBP13.24□□□□□ -0.29
LINC00963-201ENST00000412141 CXCL10P02778 98 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 PPFIA1Q13136 1202 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
LINC00963-201ENST00000412141 CEP55Q53EZ4 464 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC00963-201ENST00000412141 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 RASGRP4Q8TDF6 673 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 JPH1Q9HDC5 661 aaPredicted RBP13.24□□□□□ -0.29
LINC00963-201ENST00000412141 SLC9A2Q9UBY0 812 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 MTUS1Q9ULD2 1270 aa13.24□□□□□ -0.29
LINC00963-201ENST00000412141 TANC1Q9C0D5 1861 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 EPOPA6NHQ4 379 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 DTNBO60941 627 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 PARNO95453 639 aaKnown RBP13.23□□□□□ -0.29
LINC00963-201ENST00000412141 PDIA3P30101 505 aaKnown RBP13.23□□□□□ -0.29
LINC00963-201ENST00000412141 HOXC8P31273 242 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 RCAN1P53805 252 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 TAP1Q03518 808 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 STK3Q13188 491 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-201ENST00000412141 PKN1Q16512 942 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 KRT40Q6A162 431 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 RUFY3Q7L099 469 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-201ENST00000412141 SMARCAD1Q9H4L7 1026 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 PPP4R2Q9NY27 417 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 ERAP1Q9NZ08 941 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 TRPC6Q9Y210 931 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 CYP46A1Q9Y6A2 500 aa13.23□□□□□ -0.29
LINC00963-201ENST00000412141 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 NRCAMQ92823 1304 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 MAFGO15525 162 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 PRPF3O43395 683 aaKnown RBP13.22□□□□□ -0.29
LINC00963-201ENST00000412141 UPP2O95045 317 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 SREBF1P36956 1147 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
LINC00963-201ENST00000412141 ACTR2P61160 394 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 TOB2Q14106 344 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-201ENST00000412141 GRIK4Q16099 956 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 TRMT1LQ7Z2T5 733 aaKnown RBP13.22□□□□□ -0.29
LINC00963-201ENST00000412141 MYOCDQ8IZQ8 938 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 TRAPPC12Q8WVT3 735 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 PCYT2Q99447 389 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 FAM49AQ9H0Q0 323 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-201ENST00000412141 GLT8D2Q9H1C3 349 aa13.22□□□□□ -0.29
LINC00963-201ENST00000412141 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms