RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 EHHADHQ08426 723 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 C11orf57Q6ZUT1 292 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-208ENST00000410007 UNC13DQ70J99 1090 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 MICALL1Q8N3F8 863 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 MXD3Q9BW11 206 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 NXF1Q9UBU9 619 aaKnown RBP9.87□□□□□ -0.83
PBRM1-208ENST00000410007 SFNP31947 248 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 CTNNA1P35221 906 aaKnown RBP9.87□□□□□ -0.83
PBRM1-208ENST00000410007 ARHGAP4P98171 946 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 EP400NLQ6ZTU2 488 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 ZBTB33Q86T24 672 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 SGMS1Q86VZ5 419 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 NLRP4Q96MN2 994 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 MSTO1Q9BUK6 570 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 ATP6V0A4Q9HBG4 840 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 AFG3L2Q9Y4W6 797 aa9.87□□□□□ -0.83
PBRM1-208ENST00000410007 H7C0C1 242 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 COBLO75128 1261 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 LRRN2O75325 713 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 ATF2P15336 505 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 MAPK4P31152 587 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 DDIT3P35638 169 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 ATP5OP48047 213 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 VPS41P49754 854 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 ITKQ08881 620 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 C10orf76Q5T2E6 689 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 RESP18Q5W5W9 173 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 CATSPER4Q7RTX7 472 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 DDX23Q9BUQ8 820 aaKnown RBP9.86□□□□□ -0.83
PBRM1-208ENST00000410007 LRRC4Q9HBW1 653 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 KIAA1586Q9HCI6 787 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 WDR70Q9NW82 654 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 SETD1BQ9UPS6 1966 aaKnown RBP9.86□□□□□ -0.83
PBRM1-208ENST00000410007 PTPRMP28827 1452 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 PEX3P56589 373 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 USP17L6PQ6QN14 398 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 ARMCX2Q7L311 632 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 NSUN4Q96CB9 384 aaKnown RBP9.86□□□□□ -0.83
PBRM1-208ENST00000410007 NDST4Q9H3R1 872 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 BARHL2Q9NY43 387 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 SLC12A6Q9UHW9 1150 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 EFCAB8A8MWE9 144 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 RBL2Q08999 1139 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 QRICH1Q2TAL8 776 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 CCDC170Q8IYT3 715 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 PPFIBP2Q8ND30 876 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 STMN2Q93045 179 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 UBE2TQ9NPD8 197 aaPredicted RBP9.86□□□□□ -0.83
PBRM1-208ENST00000410007 HOMER3Q9NSC5 361 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 SYNJ2BP-COX16A0A087WUM0 186 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 CSF1RP07333 972 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 MARK3P27448 753 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 CHRNA5P30532 468 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 C12orf60Q5U649 245 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 DNAJC24Q6P3W2 148 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 FAM49AQ9H0Q0 323 aaPredicted RBP9.86□□□□□ -0.83
PBRM1-208ENST00000410007 ALDH8A1Q9H2A2 487 aaPredicted RBP9.86□□□□□ -0.83
PBRM1-208ENST00000410007 ACAD9Q9H845 621 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 COX16Q9P0S2 106 aa9.86□□□□□ -0.83
PBRM1-208ENST00000410007 MKRN1Q9UHC7 482 aaKnown RBP9.86□□□□□ -0.83
PBRM1-208ENST00000410007 SPATA31A5Q5VU36 1347 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 SPATA31A7Q8IWB4 1347 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 NMT2O60551 498 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 PRPSAP1Q14558 356 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 TTLL4Q14679 1199 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 FASTKD5Q7L8L6 764 aaKnown RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 VSIG1Q86XK7 387 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 CCDC68Q9H2F9 335 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 SEPT10Q9P0V9 454 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 NEXMIFQ5QGS0 1516 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 ADAMTS13Q76LX8 1427 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 PPRC1Q5VV67 1664 aaKnown RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 GUCY2FP51841 1108 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 TPD52P55327 224 aaPredicted RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 PTPROQ16827 1216 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 TSGA10IPQ3SY00 556 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 KAZNQ674X7 775 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 CCDC62Q6P9F0 684 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 SDCCAG8Q86SQ7 713 aaPredicted RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 C7orf31Q8N865 590 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 SAMSN1Q9NSI8 373 aaKnown RBP9.85□□□□□ -0.83
PBRM1-208ENST00000410007 PVALEFA0A1B0GWK0 134 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 OSTNP61366 133 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 TNFAIP2Q03169 654 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 PPP2R5CQ13362 524 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 CUL4BQ13620 913 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 SCARF1Q14162 830 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 MAPK6Q16659 721 aa9.85□□□□□ -0.83
PBRM1-208ENST00000410007 ZNF512BQ96KM6 892 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms