RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 UIMC1Q96RL1 719 aa35.39■■■■□ 3.26
TRAF3IP1-203ENST00000409739 ZNF577Q9BSK1 485 aa35.39■■■■□ 3.26
TRAF3IP1-203ENST00000409739 UMODL1Q5DID0 1318 aa35.38■■■■□ 3.25
TRAF3IP1-203ENST00000409739 CCDC194A0A1B0GVG4 234 aa35.38■■■■□ 3.25
TRAF3IP1-203ENST00000409739 KRT2P35908 639 aa35.38■■■■□ 3.25
TRAF3IP1-203ENST00000409739 INF2Q27J81 1249 aa35.38■■■■□ 3.25
TRAF3IP1-203ENST00000409739 ZNF215Q9UL58 517 aaPredicted RBP35.38■■■■□ 3.25
TRAF3IP1-203ENST00000409739 A0A1W2PPC1 479 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 DDX39AO00148 427 aaKnown RBP35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 DHX15O43143 795 aaKnown RBP35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 MMP1P03956 469 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 ACTR2P61160 394 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 HMGN5P82970 282 aaKnown RBP35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 TRIM29Q14134 588 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 PTGISQ16647 500 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 KRT40Q6A162 431 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 TMX3Q96JJ7 454 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 CTAGE1Q96RT6 745 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 BRMS1Q9HCU9 246 aa35.37■■■■□ 3.25
TRAF3IP1-203ENST00000409739 TDP2O95551 362 aa35.36■■■■□ 3.25
TRAF3IP1-203ENST00000409739 CYP2C18P33260 490 aa35.36■■■■□ 3.25
TRAF3IP1-203ENST00000409739 NR5A1Q13285 461 aa35.36■■■■□ 3.25
TRAF3IP1-203ENST00000409739 MFSD5Q6N075 450 aa35.36■■■■□ 3.25
TRAF3IP1-203ENST00000409739 PIK3AP1Q6ZUJ8 805 aa35.36■■■■□ 3.25
TRAF3IP1-203ENST00000409739 TNFRSF25Q93038 417 aa35.36■■■■□ 3.25
TRAF3IP1-203ENST00000409739 NOD1Q9Y239 953 aa35.36■■■■□ 3.25
TRAF3IP1-203ENST00000409739 EMSYQ7Z589 1322 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 CYP3A7-CYP3A51PA0A087WV96 503 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 CCNE2O96020 404 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 CYP3A7P24462 503 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 MCM2P49736 904 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 HIC1Q14526 733 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 EARS2Q5JPH6 523 aaKnown RBP35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 MOXD1Q6UVY6 613 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 LAMA3Q16787 3333 aa35.35■■■■□ 3.25
TRAF3IP1-203ENST00000409739 SMIM10L2AP0DMW4 78 aa35.34■■■■□ 3.25
TRAF3IP1-203ENST00000409739 SMIM10L2BP0DMW5 78 aa35.34■■■■□ 3.25
TRAF3IP1-203ENST00000409739 FPGSQ05932 587 aa35.34■■■■□ 3.25
TRAF3IP1-203ENST00000409739 TDHQ8IZJ6 230 aa35.34■■■■□ 3.25
TRAF3IP1-203ENST00000409739 PCYT2Q99447 389 aa35.34■■■■□ 3.25
TRAF3IP1-203ENST00000409739 WNT8AQ9H1J5 351 aa35.34■■■■□ 3.25
TRAF3IP1-203ENST00000409739 MSH4O15457 936 aa35.33■■■■□ 3.25
TRAF3IP1-203ENST00000409739 LGR5O75473 907 aa35.33■■■■□ 3.25
TRAF3IP1-203ENST00000409739 HOXC8P31273 242 aa35.33■■■■□ 3.25
TRAF3IP1-203ENST00000409739 Q4G0T1 1027 aa35.33■■■■□ 3.25
TRAF3IP1-203ENST00000409739 DIS3L2Q8IYB7 885 aaKnown RBP35.33■■■■□ 3.25
TRAF3IP1-203ENST00000409739 MBOAT7Q96N66 472 aa35.33■■■■□ 3.25
TRAF3IP1-203ENST00000409739 TBC1D22BQ9NU19 505 aa35.33■■■■□ 3.25
TRAF3IP1-203ENST00000409739 FAM205CA6NFA0 338 aa35.32■■■■□ 3.24
TRAF3IP1-203ENST00000409739 EPHB4P54760 987 aa35.32■■■■□ 3.24
TRAF3IP1-203ENST00000409739 NEK8Q86SG6 692 aa35.32■■■■□ 3.24
TRAF3IP1-203ENST00000409739 C8orf76Q96K31 380 aa35.32■■■■□ 3.24
TRAF3IP1-203ENST00000409739 SMARCAD1Q9H4L7 1026 aa35.32■■■■□ 3.24
TRAF3IP1-203ENST00000409739 BTBD18B2RXH4 712 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 ATG7O95352 703 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 ZNF200P98182 395 aaPredicted RBP35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 GUCY1B3Q02153 619 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 LETM2Q2VYF4 491 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 TMEM199Q8N511 208 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 FAM184AQ8NB25 1140 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 GLG1Q92896 1179 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 RNPEPQ9H4A4 650 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 ERAP1Q9NZ08 941 aa35.31■■■■□ 3.24
TRAF3IP1-203ENST00000409739 CSF2RAP15509 400 aa35.3■■■■□ 3.24
TRAF3IP1-203ENST00000409739 MARK3P27448 753 aa35.3■■■■□ 3.24
TRAF3IP1-203ENST00000409739 CCL23P55773 120 aa35.3■■■■□ 3.24
TRAF3IP1-203ENST00000409739 DHX38Q92620 1227 aaKnown RBP35.3■■■■□ 3.24
TRAF3IP1-203ENST00000409739 SLC5A5Q92911 643 aa35.3■■■■□ 3.24
TRAF3IP1-203ENST00000409739 C17orf102A2RUQ5 167 aa35.29■■■■□ 3.24
TRAF3IP1-203ENST00000409739 PPIGQ13427 754 aaKnown RBP eCLIP35.29■■■■□ 3.24
TRAF3IP1-203ENST00000409739 ZNF746Q6NUN9 644 aaPredicted RBP35.29■■■■□ 3.24
TRAF3IP1-203ENST00000409739 ABHD15Q6UXT9 468 aa35.29■■■■□ 3.24
TRAF3IP1-203ENST00000409739 AZI2Q9H6S1 392 aa35.29■■■■□ 3.24
TRAF3IP1-203ENST00000409739 DDX25Q9UHL0 483 aaKnown RBP35.29■■■■□ 3.24
TRAF3IP1-203ENST00000409739 TET1Q8NFU7 2136 aa35.29■■■■□ 3.24
TRAF3IP1-203ENST00000409739 IGKV6D-21A0A0A0MT36 114 aa35.28■■■■□ 3.24
TRAF3IP1-203ENST00000409739 PITPNM1O00562 1244 aa35.28■■■■□ 3.24
TRAF3IP1-203ENST00000409739 SLC37A4O43826 429 aa35.28■■■■□ 3.24
TRAF3IP1-203ENST00000409739 KRT76Q01546 638 aa35.28■■■■□ 3.24
TRAF3IP1-203ENST00000409739 GJA10Q969M2 543 aa35.28■■■■□ 3.24
TRAF3IP1-203ENST00000409739 LAMA2P24043 3122 aaKnown RBP35.28■■■■□ 3.24
TRAF3IP1-203ENST00000409739 PTK7Q13308 1070 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 BFSP2Q13515 415 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 C9orf50Q5SZB4 431 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 ETNPPLQ8TBG4 499 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 CAGE1Q8TC20 777 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 ATP6V0A1Q93050 837 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 RIT2Q99578 217 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 SETD4Q9NVD3 440 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 TCEAL9Q9UHQ7 104 aa35.27■■■■□ 3.24
TRAF3IP1-203ENST00000409739 GAS7O60861 476 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 GCFC2P16383 781 aaKnown RBP35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 SHHQ15465 462 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 LRCH2Q5VUJ6 765 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 PPP4R3AQ6IN85 833 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 CCDC60Q8IWA6 550 aaPredicted RBP35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 CCDC155Q8N6L0 562 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 FBXO18Q8NFZ0 1043 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 LMBR1Q8WVP7 490 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 WNT8BQ93098 351 aa35.26■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms