RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 SETD4Q9NVD3 440 aa14.99□□□□□ -0.01
CHRNA1-203ENST00000409219 PROB1E7EW31 1015 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 ITGB1P05556 798 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 GHRP10912 638 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 ADAM17P78536 824 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 PGM5Q15124 567 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 TBC1D10CQ8IV04 446 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 PNMA1Q8ND90 353 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 PHF7Q9BWX1 381 aaPredicted RBP14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 BCAS3Q9H6U6 928 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 MLXIPQ9HAP2 919 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 LAMA4Q16363 1823 aa14.98□□□□□ -0.01
CHRNA1-203ENST00000409219 NEDD4P46934 1319 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 DGKIO75912 1065 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 PDGFBP01127 241 aaPredicted RBP14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 CHRNA1P02708 482 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 ICAM3P32942 547 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 NRIP1P48552 1158 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 TRIM50Q86XT4 487 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 LMBR1Q8WVP7 490 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 ZFP91Q96JP5 570 aaPredicted RBP14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 EHMT1Q9H9B1 1298 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 JMJD4Q9H9V9 463 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 MRPL42Q9Y6G3 142 aaKnown RBP14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 KAT6AQ92794 2004 aa14.97□□□□□ -0.01
CHRNA1-203ENST00000409219 TGFB3P10600 412 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 GNAT1P11488 350 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 LPIN1Q14693 890 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 STOX1Q6ZVD7 989 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 RBM23Q86U06 439 aaKnown RBP14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 VSIG10LQ86VR7 867 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 SPPL3Q8TCT6 385 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 USP26Q9BXU7 913 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 PCDHGC5Q9Y5F6 944 aa14.96□□□□□ -0.01
CHRNA1-203ENST00000409219 DNAH14Q0VDD8 3507 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 A0A0D9SFI3 127 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 PRR23AA6NEV1 266 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 NOP56O00567 594 aaKnown RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 ENPP3O14638 875 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 DHX16O60231 1041 aaKnown RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 PCP11498 1178 aaKnown RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 HOXA13P31271 388 aaPredicted RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 ARHGAP4P98171 946 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 MGAT3Q09327 533 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 PTPN21Q16825 1174 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 ASPRV1Q53RT3 343 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 MFSD6Q6ZSS7 791 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 DGKHQ86XP1 1220 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 KLHL23Q8NBE8 558 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 POF1BQ8WVV4 589 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 LINC01599Q8WXQ3 324 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 SUSD6Q92537 303 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 FAM227BQ96M60 508 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 HELLSQ9NRZ9 838 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 GVINP1Q7Z2Y8 2422 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 SALL3Q9BXA9 1300 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 GALR2O43603 387 aaPredicted RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 ATF7P17544 494 aaPredicted RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 MX1P20591 662 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 NAALADL2Q58DX5 795 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 ERMP1Q7Z2K6 904 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 ZNF589Q86UQ0 364 aaPredicted RBP14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 VAT1LQ9HCJ6 419 aa14.95□□□□□ -0.02
CHRNA1-203ENST00000409219 PPP1R11O60927 126 aaPredicted RBP14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 KDM4AO75164 1064 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 CCND2P30279 289 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 NUBP1P53384 320 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 CMTR2Q8IYT2 770 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 CRIPAKQ8N1N5 446 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 VN1R2Q8NFZ6 395 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 ESR2Q92731 530 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 GPR20Q99678 358 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 AMNQ9BXJ7 453 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 MAP3K20Q9NYL2 800 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 TELO2Q9Y4R8 837 aa14.94□□□□□ -0.02
CHRNA1-203ENST00000409219 NBL1P41271 181 aa14.93□□□□□ -0.02
CHRNA1-203ENST00000409219 PAN2Q504Q3 1202 aaKnown RBP14.93□□□□□ -0.02
CHRNA1-203ENST00000409219 FBXO47Q5MNV8 452 aa14.93□□□□□ -0.02
CHRNA1-203ENST00000409219 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
CHRNA1-203ENST00000409219 RIPOR3Q96MK2 946 aa14.93□□□□□ -0.02
CHRNA1-203ENST00000409219 KAT14Q9H8E8 782 aa14.93□□□□□ -0.02
CHRNA1-203ENST00000409219 ZNF215Q9UL58 517 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-203ENST00000409219 NRCAMQ92823 1304 aa14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 LOXHD1Q8IVV2 1947 aa14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 PARP1P09874 1014 aaKnown RBP14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 CYFIP1Q7L576 1253 aa14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 EVI5LQ96CN4 794 aa14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 RNF41Q9H4P4 317 aaPredicted RBP14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 TRPC6Q9Y210 931 aa14.92□□□□□ -0.02
CHRNA1-203ENST00000409219 PER2O15055 1255 aa14.91□□□□□ -0.02
CHRNA1-203ENST00000409219 GATMP50440 423 aa14.91□□□□□ -0.02
CHRNA1-203ENST00000409219 MRPS9P82933 396 aaKnown RBP14.91□□□□□ -0.02
CHRNA1-203ENST00000409219 MCMDC2Q4G0Z9 681 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms