RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PDCL2Q8N4E4 241 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 TRIM11Q96F44 468 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 CCDC68Q9H2F9 335 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 NEDD4P46934 1319 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 F8W8V4 182 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 CYP21A2P08686 494 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 DDIT3P35638 169 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 RECQLP46063 649 aaPredicted RBP5.46□□□□□ -1.53
SCN3A-203ENST00000409101 TRIM28Q13263 835 aaKnown RBP5.46□□□□□ -1.53
SCN3A-203ENST00000409101 TSTA3Q13630 321 aaPredicted RBP5.46□□□□□ -1.53
SCN3A-203ENST00000409101 ARL13BQ3SXY8 428 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 TYW1BQ6NUM6 668 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 FAM173BQ6P4H8 233 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 USP50Q70EL3 339 aaPredicted RBP5.46□□□□□ -1.53
SCN3A-203ENST00000409101 TRMT44Q8IYL2 757 aaKnown RBP5.46□□□□□ -1.53
SCN3A-203ENST00000409101 NEK9Q8TD19 979 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 POLR3FQ9H1D9 316 aaPredicted RBP5.46□□□□□ -1.53
SCN3A-203ENST00000409101 KCNK9Q9NPC2 374 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 ASIC3Q9UHC3 531 aa5.46□□□□□ -1.53
SCN3A-203ENST00000409101 FNDC3AQ9Y2H6 1198 aaKnown RBP5.46□□□□□ -1.53
SCN3A-203ENST00000409101 FAM170AA1A519 330 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 OPA1O60313 960 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 PLEKHA8P1O95397 391 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 VIMP08670 466 aaKnown RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 CTSHP09668 335 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 MAPK4P31152 587 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 PEX3P56589 373 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 ZBTB16Q05516 673 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 RNF187Q5TA31 235 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 LGSNQ5TDP6 509 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 INTS5Q6P9B9 1019 aaKnown RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 PALM2Q8IXS6 379 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 GPC2Q8N158 579 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 ANKRD13CQ8N6S4 541 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 ZFP91Q96JP5 570 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 POLR3EQ9NVU0 708 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 PREX1Q8TCU6 1659 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 FLT1P17948 1338 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 BNIP3LO60238 219 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 DDNO94850 711 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 NNMTP40261 264 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 MAGEA1P43355 309 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 GCLCP48506 637 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 RBM10P98175 930 aaKnown RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 KRT33BQ14525 404 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 OR6B2Q6IFH4 312 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 FAM117BQ6P1L5 589 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 PEX26Q7Z412 305 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 MRRFQ96E11 262 aaKnown RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 CCDC85CA6NKD9 419 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 AFPP02771 609 aaKnown RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 NR2F2P24468 414 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 DGKDQ16760 1214 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 TMTC3Q6ZXV5 915 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 AFG1LQ8WV93 481 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 UBLCP1Q8WVY7 318 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-203ENST00000409101 GLT1D1Q96MS3 346 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 TTC1Q99614 292 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 AMFRQ9UKV5 643 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 NFE2L3Q9Y4A8 694 aa5.46□□□□□ -1.54
SCN3A-203ENST00000409101 CLIC2O15247 247 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CLDN3O15551 220 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TRAPPC3O43617 180 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 NMT2O60551 498 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 IGSF3O75054 1194 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CD58P19256 250 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ABCB4P21439 1286 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 LIFRP42702 1097 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 VAV2P52735 878 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 POLR2FP61218 127 aaKnown RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 PSMC5P62195 406 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 EXOC3L4Q17RC7 722 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 KRBA2Q6ZNG9 492 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ERO1BQ86YB8 467 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 GRK7Q8WTQ7 553 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CLIC6Q96NY7 704 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 VPS33BQ9H267 617 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 UBN1Q9NPG3 1134 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TSKSQ9UJT2 592 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ANAPC4Q9UJX5 808 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 PIN4Q9Y237 131 aaKnown RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 ATP11BQ9Y2G3 1177 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CLIC4Q9Y696 253 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CMA1P23946 247 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CBX1P83916 185 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 KRT17Q04695 432 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 PAK2Q13177 524 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 QRICH1Q2TAL8 776 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 EFCAB13Q8IY85 973 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 CCDC105Q8IYK2 499 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 NSUN4Q96CB9 384 aaKnown RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 OPTNQ96CV9 577 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 DYDC2Q96IM9 177 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 TRIM56Q9BRZ2 755 aaKnown RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 SMARCAD1Q9H4L7 1026 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 JPH1Q9HDC5 661 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-203ENST00000409101 MOSPD1Q9UJG1 213 aa5.45□□□□□ -1.54
SCN3A-203ENST00000409101 SCAF8Q9UPN6 1271 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms