RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 USP17L24Q0WX57 530 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 TNFAIP1Q13829 316 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 MUM1Q2TAK8 710 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 USP17L6PQ6QN14 398 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 PIGOQ8TEQ8 1089 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 RAB3IPQ96QF0 476 aaPredicted RBP17.11■□□□□ 0.33
SSFA2-202ENST00000409001 MMS19Q96T76 1030 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 PCDHB4Q9Y5E5 795 aa17.11■□□□□ 0.33
SSFA2-202ENST00000409001 NCK2O43639 380 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 POLR2BP30876 1174 aaKnown RBP17.1■□□□□ 0.33
SSFA2-202ENST00000409001 ATP2C1P98194 919 aaPredicted RBP17.1■□□□□ 0.33
SSFA2-202ENST00000409001 DR1Q01658 176 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 GRAPQ13588 217 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 TRIP13Q15645 432 aaPredicted RBP17.1■□□□□ 0.33
SSFA2-202ENST00000409001 E2F4Q16254 413 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 TTBK2Q6IQ55 1244 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
SSFA2-202ENST00000409001 PAGR1Q9BTK6 254 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 CYP19A1P11511 503 aaPredicted RBP17.1■□□□□ 0.33
SSFA2-202ENST00000409001 TPD52P55327 224 aaPredicted RBP17.1■□□□□ 0.33
SSFA2-202ENST00000409001 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 NLGN1Q8N2Q7 840 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 TMEM260Q9NX78 707 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 CHD1O14646 1710 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 ARHGAP42A6NI28 874 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 P4HA1P13674 534 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 IGDCC4Q8TDY8 1250 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 CHP1Q99653 195 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 VCXQ9H320 206 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 RPSAP08865 295 aaKnown RBP17.1■□□□□ 0.33
SSFA2-202ENST00000409001 IL9RQ01113 521 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
SSFA2-202ENST00000409001 RASGRF2O14827 1237 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 TNNC2P02585 160 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 VSNL1P62760 191 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 MRPS9P82933 396 aaKnown RBP17.09■□□□□ 0.33
SSFA2-202ENST00000409001 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 HOOK2Q96ED9 719 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
SSFA2-202ENST00000409001 PLAAQ9Y263 795 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 CPDO75976 1380 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 CACNB3P54284 484 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 ANTXR2P58335 489 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 YWHAGP61981 247 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSFA2-202ENST00000409001 CEP95Q96GE4 821 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 CEP72Q9P209 647 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 SEPT9Q9UHD8 586 aaPredicted RBP17.09■□□□□ 0.33
SSFA2-202ENST00000409001 TSPOAP1O95153 1857 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
SSFA2-202ENST00000409001 FCER1AP12319 257 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 STAT2P52630 851 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 SEPT14Q6ZU15 432 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 KLHL29Q96CT2 875 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 PVALEFA0A1B0GWK0 134 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 HMGB1P1B2RPK0 211 aaPredicted RBP17.09■□□□□ 0.33
SSFA2-202ENST00000409001 SGK1O00141 431 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 HSPA6P17066 643 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 FAM133BQ5BKY9 247 aaKnown RBP17.09■□□□□ 0.33
SSFA2-202ENST00000409001 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 OSBPL9Q96SU4 736 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 TMEM206Q9H813 350 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 ANAPC5Q9UJX4 755 aa17.09■□□□□ 0.33
SSFA2-202ENST00000409001 CA8P35219 290 aa17.08■□□□□ 0.33
SSFA2-202ENST00000409001 KCNH2Q12809 1159 aa17.08■□□□□ 0.33
SSFA2-202ENST00000409001 HIBCHQ6NVY1 386 aaPredicted RBP17.08■□□□□ 0.33
SSFA2-202ENST00000409001 STAG2Q8N3U4 1231 aa17.08■□□□□ 0.33
SSFA2-202ENST00000409001 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.33
SSFA2-202ENST00000409001 MAD1L1Q9Y6D9 718 aa17.08■□□□□ 0.33
SSFA2-202ENST00000409001 GOLGA8IPA6NC78 632 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 GOLGA8JA6NMD2 632 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 SFR1Q86XK3 245 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 DHX36Q9H2U1 1008 aaKnown RBP17.08■□□□□ 0.32
SSFA2-202ENST00000409001 TUBE1Q9UJT0 475 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 CUL1Q13616 776 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 ZMYND12Q9H0C1 365 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.08■□□□□ 0.32
SSFA2-202ENST00000409001 SNX24Q9Y343 169 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 H7C0C1 242 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 CCDC188H7C350 402 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 ATP5OP48047 213 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSFA2-202ENST00000409001 USP14P54578 494 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 ATP6V0A1Q93050 837 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 ZNF408Q9H9D4 720 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 BARHL2Q9NY43 387 aa17.08■□□□□ 0.32
SSFA2-202ENST00000409001 A0A1B0GTH6 734 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 FRMD3A2A2Y4 597 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 BAG2O95816 211 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 POTEB3A0JP26 581 aa17.07■□□□□ 0.32
SSFA2-202ENST00000409001 POTECB2RU33 542 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms