RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 GIT2Q14161 759 aa17.95■□□□□ 0.46
CDKN1A-203ENST00000405375 SMC1AQ14683 1233 aaKnown RBP17.95■□□□□ 0.46
CDKN1A-203ENST00000405375 WDR93Q6P2C0 686 aa17.95■□□□□ 0.46
CDKN1A-203ENST00000405375 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
CDKN1A-203ENST00000405375 ABCB6Q9NP58 842 aa17.95■□□□□ 0.46
CDKN1A-203ENST00000405375 CEP72Q9P209 647 aa17.95■□□□□ 0.46
CDKN1A-203ENST00000405375 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
CDKN1A-203ENST00000405375 SSU72P8A0A1W2PR75 194 aa17.94■□□□□ 0.46
CDKN1A-203ENST00000405375 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-203ENST00000405375 HOXA13P31271 388 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-203ENST00000405375 TRIM58Q8NG06 486 aa17.94■□□□□ 0.46
CDKN1A-203ENST00000405375 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-203ENST00000405375 DNM3Q9UQ16 869 aa17.94■□□□□ 0.46
CDKN1A-203ENST00000405375 AKR1B10O60218 316 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 KRT18P05783 430 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 CASP5P51878 434 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 PABPC4Q13310 644 aaKnown RBP eCLIP17.93■□□□□ 0.462e-8■■■■■ 36.1
CDKN1A-203ENST00000405375 CACNA2D4Q7Z3S7 1137 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 CYP2W1Q8TAV3 490 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 SYN2Q92777 582 aaPredicted RBP17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 RPGRIP1Q96KN7 1286 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 DEF6Q9H4E7 631 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 STK24Q9Y6E0 443 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 CAPN6Q9Y6Q1 641 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 ATAD5Q96QE3 1844 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 MEIS1O00470 390 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 ECE1P42892 770 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 USP14P54578 494 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 ADAM9Q13443 819 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 EPM2AIP1Q7L775 607 aaPredicted RBP17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 MSL3Q8N5Y2 521 aaKnown RBP17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 REEP2Q9BRK0 252 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 FAM184BQ9ULE4 1060 aa17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDKN1A-203ENST00000405375 RBAK-RBAKDNI3L0D1 243 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 PJA2O43164 708 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 PPIP5K2O43314 1243 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 TLR2O60603 784 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 CKAP4Q07065 602 aaKnown RBP17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 KIAA1755Q5JYT7 1200 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 ZNF771Q7L3S4 317 aaPredicted RBP17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 SUPT20HQ8NEM7 779 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 NUCKS1Q9H1E3 243 aaKnown RBP17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.92■□□□□ 0.466e-6■■□□□ 12.3
CDKN1A-203ENST00000405375 TRAF3IP3Q9Y228 551 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 JRKLQ9Y4A0 524 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 PSME4Q14997 1843 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 IGLV3-22A0A075B6J6 115 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 SPDYE2BA6NHP3 402 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 PDE2AO00408 941 aaPredicted RBP17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 SPDYE6P0CI01 402 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 OAS2P29728 719 aaKnown RBP17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 HOXD13P35453 343 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 STAT2P52630 851 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 HDXQ7Z353 690 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 TEX2Q8IWB9 1127 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 MLXIPQ9HAP2 919 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 NLRC4Q9NPP4 1024 aa17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
CDKN1A-203ENST00000405375 ZNF185O15231 689 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 TACC1O75410 805 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 EZH2Q15910 746 aaKnown RBP17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 POTEAQ6S8J7 498 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 SFR1Q86XK3 245 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 GPIHBP1Q8IV16 184 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 CAPZA3Q96KX2 299 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 POLR3CQ9BUI4 534 aaPredicted RBP17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 LSM14BQ9BX40 385 aaKnown RBP17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 GBP3Q9H0R5 595 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 ZHX3Q9H4I2 956 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 SUGCTQ9HAC7 445 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 SNX12Q9UMY4 172 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 TMX2Q9Y320 296 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 CETN3O15182 167 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 NR2F2P24468 414 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 MAGEA1P43355 309 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 GFPT1Q06210 699 aaPredicted RBP17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 ACER1Q8TDN7 264 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 CRACR2AQ9BSW2 395 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 JADE2Q9NQC1 790 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 MYH10P35580 1976 aa17.91■□□□□ 0.46
CDKN1A-203ENST00000405375 TNS1Q9HBL0 1735 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 TCP10L2B9ZVM9 353 aa17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 EML1O00423 815 aa17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 POLR2FP61218 127 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 EN1Q05925 392 aaPredicted RBP17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 KNOP1Q1ED39 458 aaKnown RBP17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 ARHGEF10LQ9HCE6 1279 aa17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 SALL4Q9UJQ4 1053 aa17.9■□□□□ 0.46
CDKN1A-203ENST00000405375 POLR3GO15318 223 aaPredicted RBP17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 MOCS3O95396 460 aa17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 PRLRP16471 622 aa17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 APBA1Q02410 837 aa17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 CYP4A11Q02928 519 aa17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 BMT2Q1RMZ1 405 aa17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 SLC9C1Q4G0N8 1177 aa17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 SFMBT2Q5VUG0 894 aa17.89■□□□□ 0.46
CDKN1A-203ENST00000405375 CREG2Q8IUH2 290 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms