RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 BANK1Q8NDB2 785 aa14.21□□□□□ -0.13
PRAME-204ENST00000403441 CTCFLQ8NI51 663 aaPredicted RBP14.21□□□□□ -0.13
PRAME-204ENST00000403441 LMBR1Q8WVP7 490 aa14.21□□□□□ -0.13
PRAME-204ENST00000403441 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.13
PRAME-204ENST00000403441 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.13
PRAME-204ENST00000403441 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
PRAME-204ENST00000403441 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
PRAME-204ENST00000403441 RTEL1Q9NZ71 1219 aa14.21□□□□□ -0.13
PRAME-204ENST00000403441 FAM50BQ9Y247 325 aa14.21□□□□□ -0.13
PRAME-204ENST00000403441 NRCAMQ92823 1304 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 E7EWF7 191 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 CDC45O75419 566 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 SEMA3FQ13275 785 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 EP400NLQ6ZTU2 488 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 TMEM192Q8IY95 271 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.2□□□□□ -0.14
PRAME-204ENST00000403441 SENP7Q9BQF6 1050 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 SPZ1Q9BXG8 430 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 CD320Q9NPF0 282 aa14.2□□□□□ -0.14
PRAME-204ENST00000403441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.19□□□□□ -0.14
PRAME-204ENST00000403441 GRXCR2A6NFK2 248 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 RBAK-RBAKDNI3L0D1 243 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 PIK3CDO00329 1044 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 DDAH1O94760 285 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 CTNNB1P35222 781 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 FAM26DQ5JW98 314 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 TAF2Q6P1X5 1199 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 RSPH3Q86UC2 560 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 MB21D2Q8IYB1 491 aaPredicted RBP14.19□□□□□ -0.14
PRAME-204ENST00000403441 FIBCD1Q8N539 461 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 PABPC5Q96DU9 382 aaKnown RBP14.19□□□□□ -0.14
PRAME-204ENST00000403441 IL17RAQ96F46 866 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 CDHR1Q96JP9 859 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 MAP3K14Q99558 947 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 NSUN3Q9H649 340 aaKnown RBP14.19□□□□□ -0.14
PRAME-204ENST00000403441 C11orf16Q9NQ32 467 aa14.19□□□□□ -0.14
PRAME-204ENST00000403441 RALGAPA2Q2PPJ7 1873 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 H3BQ06 376 aaPredicted RBP14.18□□□□□ -0.14
PRAME-204ENST00000403441 NCK2O43639 380 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 ALADP13716 330 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 IL9P15248 144 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 TCF7P36402 384 aaPredicted RBP14.18□□□□□ -0.14
PRAME-204ENST00000403441 ADAM17P78536 824 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 TCEAL5Q5H9L2 206 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 USP17L6PQ6QN14 398 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 CASC1Q6TDU7 716 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 ZNF654Q8IZM8 581 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 NEK9Q8TD19 979 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 GPRASP2Q96D09 838 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 LZTS2Q9BRK4 669 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 MTA3Q9BTC8 594 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 C11orf84Q9BUA3 381 aaPredicted RBP14.18□□□□□ -0.14
PRAME-204ENST00000403441 OSBPL7Q9BZF2 842 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 RWDD3Q9Y3V2 267 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 NLRC5Q86WI3 1866 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 DOCK5Q9H7D0 1870 aa14.18□□□□□ -0.14
PRAME-204ENST00000403441 ADGRA3Q8IWK6 1321 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 PRR33A8MZF0 331 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 SLC27A2O14975 620 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 GHRP10912 638 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 SMARCA1P28370 1054 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
PRAME-204ENST00000403441 GNAQP50148 359 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 ANTXR2P58335 489 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 PPFIA1Q13136 1202 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 CSPP1Q1MSJ5 1256 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 TSGA10IPQ3SY00 556 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 NFXL1Q6ZNB6 911 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 RPAINQ86UA6 219 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 IGDCC4Q8TDY8 1250 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 MYL10Q9BUA6 226 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 ERAP1Q9NZ08 941 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 TUBE1Q9UJT0 475 aa14.17□□□□□ -0.14
PRAME-204ENST00000403441 MEIS2O14770 477 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 CHRNA1P02708 482 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 RPLP2P05387 115 aaKnown RBP14.16□□□□□ -0.14
PRAME-204ENST00000403441 RB1P06400 928 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 COL9A3Q14050 684 aaPredicted RBP14.16□□□□□ -0.14
PRAME-204ENST00000403441 COL19A1Q14993 1142 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 CREB3L3Q68CJ9 461 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 RUFY4Q6ZNE9 571 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 GLG1Q92896 1179 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 KCNB2Q92953 911 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 PSTPIP2Q9H939 334 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 LY9Q9HBG7 655 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 CLDND1Q9NY35 253 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 PRKAG3Q9UGI9 489 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
PRAME-204ENST00000403441 KAT6AQ92794 2004 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 MUC6Q6W4X9 2439 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 PIEZO1Q92508 2521 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 CCDC69A6NI79 296 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 C5orf67F2Z3F1 127 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 CALM1P0DP23 149 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 CALM2P0DP24 149 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 CALM3P0DP25 149 aa14.15□□□□□ -0.14
PRAME-204ENST00000403441 KCNA2P16389 499 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms