RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 MBOAT7Q96N66 472 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 CTAGE1Q96RT6 745 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 ZNF577Q9BSK1 485 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 NOC4LQ9BVI4 516 aaKnown RBP21.8■■□□□ 1.08
RTN4-207ENST00000402434 HIPK3Q9H422 1215 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 BRMS1Q9HCU9 246 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 TBC1D22BQ9NU19 505 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 ACTR2P61160 394 aa21.79■■□□□ 1.08
RTN4-207ENST00000402434 NR5A1Q13285 461 aa21.79■■□□□ 1.08
RTN4-207ENST00000402434 TRIM29Q14134 588 aa21.79■■□□□ 1.08
RTN4-207ENST00000402434 Q4G0T1 1027 aa21.79■■□□□ 1.08
RTN4-207ENST00000402434 MFSD5Q6N075 450 aa21.79■■□□□ 1.08
RTN4-207ENST00000402434 TRIM50Q86XT4 487 aa21.79■■□□□ 1.08
RTN4-207ENST00000402434 UBE2OQ9C0C9 1292 aaKnown RBP21.79■■□□□ 1.08
RTN4-207ENST00000402434 ZNF215Q9UL58 517 aaPredicted RBP21.79■■□□□ 1.08
RTN4-207ENST00000402434 LGR5O75473 907 aa21.78■■□□□ 1.08
RTN4-207ENST00000402434 CCNE2O96020 404 aa21.78■■□□□ 1.08
RTN4-207ENST00000402434 CYP2C9P11712 490 aa21.78■■□□□ 1.08
RTN4-207ENST00000402434 HOXC8P31273 242 aa21.78■■□□□ 1.08
RTN4-207ENST00000402434 PTGISQ16647 500 aa21.78■■□□□ 1.08
RTN4-207ENST00000402434 HABP4Q5JVS0 413 aaKnown RBP21.78■■□□□ 1.08
RTN4-207ENST00000402434 UTP14CQ5TAP6 766 aaKnown RBP21.78■■□□□ 1.08
RTN4-207ENST00000402434 PCYT2Q99447 389 aa21.78■■□□□ 1.08
RTN4-207ENST00000402434 EMSYQ7Z589 1322 aa21.78■■□□□ 1.08
RTN4-207ENST00000402434 BTBD18B2RXH4 712 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 MSH4O15457 936 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 TDP2O95551 362 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 EARS2Q5JPH6 523 aaKnown RBP21.77■■□□□ 1.08
RTN4-207ENST00000402434 PIK3AP1Q6ZUJ8 805 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 NEK8Q86SG6 692 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 C8orf76Q96K31 380 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 PPP1R12CQ9BZL4 782 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 SMARCAD1Q9H4L7 1026 aa21.77■■□□□ 1.08
RTN4-207ENST00000402434 IGKV6D-21A0A0A0MT36 114 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 CYP2C18P33260 490 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 FPGSQ05932 587 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 HIC1Q14526 733 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 PPP4R3AQ6IN85 833 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 ABHD15Q6UXT9 468 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 DIS3L2Q8IYB7 885 aaKnown RBP21.77■■□□□ 1.07
RTN4-207ENST00000402434 FBXO18Q8NFZ0 1043 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 UIMC1Q96RL1 719 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 RIT2Q99578 217 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 RNPEPQ9H4A4 650 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 ERAP1Q9NZ08 941 aa21.77■■□□□ 1.07
RTN4-207ENST00000402434 UMODL1Q5DID0 1318 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 SMIM10L2AP0DMW4 78 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 SMIM10L2BP0DMW5 78 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 GCFC2P16383 781 aaKnown RBP21.76■■□□□ 1.07
RTN4-207ENST00000402434 FOSBP53539 338 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 ZNF746Q6NUN9 644 aaPredicted RBP21.76■■□□□ 1.07
RTN4-207ENST00000402434 TMEM199Q8N511 208 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 FAM184AQ8NB25 1140 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 GLG1Q92896 1179 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 SLC5A5Q92911 643 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 NOD1Q9Y239 953 aa21.76■■□□□ 1.07
RTN4-207ENST00000402434 FAM205CA6NFA0 338 aa21.75■■□□□ 1.07
RTN4-207ENST00000402434 LETM2Q2VYF4 491 aa21.75■■□□□ 1.07
RTN4-207ENST00000402434 PLPPR4Q7Z2D5 763 aa21.75■■□□□ 1.07
RTN4-207ENST00000402434 TDHQ8IZJ6 230 aa21.75■■□□□ 1.07
RTN4-207ENST00000402434 WNT8AQ9H1J5 351 aa21.75■■□□□ 1.07
RTN4-207ENST00000402434 AZI2Q9H6S1 392 aa21.75■■□□□ 1.07
RTN4-207ENST00000402434 DDX25Q9UHL0 483 aaKnown RBP21.75■■□□□ 1.07
RTN4-207ENST00000402434 TRIP12Q14669 1992 aaPredicted RBP21.74■■□□□ 1.07
RTN4-207ENST00000402434 DDX39AO00148 427 aaKnown RBP21.74■■□□□ 1.07
RTN4-207ENST00000402434 CSF2RAP15509 400 aa21.74■■□□□ 1.07
RTN4-207ENST00000402434 EPHB4P54760 987 aa21.74■■□□□ 1.07
RTN4-207ENST00000402434 ADAM17P78536 824 aa21.74■■□□□ 1.07
RTN4-207ENST00000402434 ZNF200P98182 395 aaPredicted RBP21.74■■□□□ 1.07
RTN4-207ENST00000402434 KRT76Q01546 638 aa21.74■■□□□ 1.07
RTN4-207ENST00000402434 RBL2Q08999 1139 aa21.74■■□□□ 1.07
RTN4-207ENST00000402434 SAFBQ15424 915 aaKnown RBP eCLIP21.74■■□□□ 1.071e-6■■□□□ 14.5
RTN4-207ENST00000402434 SMAP1Q8IYB5 467 aaPredicted RBP21.74■■□□□ 1.07
RTN4-207ENST00000402434 ETNPPLQ8TBG4 499 aa21.74■■□□□ 1.07
RTN4-207ENST00000402434 NAP1L4Q99733 375 aaKnown RBP21.74■■□□□ 1.07
RTN4-207ENST00000402434 C17orf102A2RUQ5 167 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 SLC37A4O43826 429 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 PSMD10O75832 226 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 SLC26A2P50443 739 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 STAT5BP51692 787 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 GUCY1B3Q02153 619 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 PTK7Q13308 1070 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 BFSP2Q13515 415 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 SERINC5Q86VE9 423 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 CAGE1Q8TC20 777 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 AFAP1L1Q8TED9 768 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 DHX38Q92620 1227 aaKnown RBP21.73■■□□□ 1.07
RTN4-207ENST00000402434 SETD4Q9NVD3 440 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 NRCAMQ92823 1304 aa21.73■■□□□ 1.07
RTN4-207ENST00000402434 CCNT1O60563 726 aaKnown RBP21.72■■□□□ 1.07
RTN4-207ENST00000402434 GAS7O60861 476 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 GNAT1P11488 350 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 CCL23P55773 120 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 PPIGQ13427 754 aaKnown RBP eCLIP21.72■■□□□ 1.07
RTN4-207ENST00000402434 LRCH2Q5VUJ6 765 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 MIS18BP1Q6P0N0 1132 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 C16orf59Q7L2K0 433 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 ATP6V0A1Q93050 837 aa21.72■■□□□ 1.07
RTN4-207ENST00000402434 FOXP1Q9H334 677 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms