RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TET1Q8NFU7 2136 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 LARGE1O95461 756 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 FGBP02675 491 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 ARP10275 920 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 FOSBP53539 338 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 C8orf34Q49A92 452 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 ZNF697Q5TEC3 545 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 MCTP2Q6DN12 878 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 FAM109BQ6ICB4 259 aaPredicted RBP9.58□□□□□ -0.88
USP16-202ENST00000399973 C16orf59Q7L2K0 433 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 RPUSD2Q8IZ73 545 aaKnown RBP9.58□□□□□ -0.88
USP16-202ENST00000399973 NECAB1Q8N987 351 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 CAGE1Q8TC20 777 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 AFAP1L1Q8TED9 768 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 DHX38Q92620 1227 aaKnown RBP9.58□□□□□ -0.88
USP16-202ENST00000399973 ATP6V0A1Q93050 837 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 AGO4Q9HCK5 861 aaKnown RBP9.58□□□□□ -0.88
USP16-202ENST00000399973 SLC9A2Q9UBY0 812 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 LAMA3Q16787 3333 aa9.58□□□□□ -0.88
USP16-202ENST00000399973 COL4A4P53420 1690 aaPredicted RBP9.58□□□□□ -0.88
USP16-202ENST00000399973 STK36Q9NRP7 1315 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 GRXCR1A8MXD5 290 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 FAM86B1E9PN63 330 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 PFKFB2O60825 505 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 CTSHP09668 335 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 FAM86B2P0C5J1 330 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 IQCF3P0C7M6 154 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 ACTN1P12814 892 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 SELPP16109 830 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 RFC2P35250 354 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 THPOP40225 353 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 IGBP1P78318 339 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 SETQ01105 290 aaPredicted RBP9.57□□□□□ -0.88
USP16-202ENST00000399973 PPFIA1Q13136 1202 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 PTK7Q13308 1070 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 ITGB3BPQ13352 177 aaPredicted RBP9.57□□□□□ -0.88
USP16-202ENST00000399973 HIC1Q14526 733 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 PRR16Q569H4 304 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 BLIDQ8IZY5 108 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 LMBR1Q8WVP7 490 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 SEPT1Q8WYJ6 367 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 WNT8BQ93098 351 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 GTF3C6Q969F1 213 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 CTAGE1Q96RT6 745 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 ZNF577Q9BSK1 485 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 AZI2Q9H6S1 392 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 SH3GLB2Q9NR46 395 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 SETD4Q9NVD3 440 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 ERAP1Q9NZ08 941 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 CXXC1Q9P0U4 656 aaPredicted RBP9.57□□□□□ -0.88
USP16-202ENST00000399973 PCDHA4Q9UN74 947 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 KCNJ14Q9UNX9 436 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 TRPC6Q9Y210 931 aa9.57□□□□□ -0.88
USP16-202ENST00000399973 NFASCO94856 1347 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 EMSYQ7Z589 1322 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 IGLV3-22A0A075B6J6 115 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
USP16-202ENST00000399973 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
USP16-202ENST00000399973 GSTTP1A0A1W2PQM5 241 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 RBAK-RBAKDNI3L0D1 243 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 MEIS1O00470 390 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 BACH1O14867 736 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 MAFGO15525 162 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 TREHO43280 583 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 PFKMP08237 780 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 GNAT1P11488 350 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 CKBP12277 381 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 XBP1P17861 261 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 DNAJB2P25686 324 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 ACTR2P61160 394 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 SMAD3P84022 425 aaKnown RBP9.56□□□□□ -0.88
USP16-202ENST00000399973 ME3Q16798 604 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 NIPA1Q7RTP0 329 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 SERINC5Q86VE9 423 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 HERVK_113Q902F9 699 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 RNPEPQ9H4A4 650 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 SMARCAD1Q9H4L7 1026 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 GJB4Q9NTQ9 266 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 ORC3Q9UBD5 711 aaPredicted RBP9.56□□□□□ -0.88
USP16-202ENST00000399973 SLC4A7Q9Y6M7 1214 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
USP16-202ENST00000399973 SZT2Q5T011 3432 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 CCDC194A0A1B0GVG4 234 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 IPO5O00410 1097 aaKnown RBP9.55□□□□□ -0.88
USP16-202ENST00000399973 CHMP2AO43633 222 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 CTDNEP1O95476 244 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 TDP2O95551 362 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 CCNE2O96020 404 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 CYP3A4P08684 503 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 PBX2P40425 430 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 KCNJ6P48051 423 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 GRIK4Q16099 956 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 ZNF618Q5T7W0 954 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 TBCKQ8TEA7 893 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 CRYGNQ8WXF5 182 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 WASF1Q92558 559 aa9.55□□□□□ -0.88
USP16-202ENST00000399973 UPF2Q9HAU5 1272 aaKnown RBP9.55□□□□□ -0.88
USP16-202ENST00000399973 TUBE1Q9UJT0 475 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms