RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 USP17L19D6RCP7 530 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 USP17L20D6RJB6 530 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 GYS2P54840 703 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 SPIRE1Q08AE8 756 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 USP17L24Q0WX57 530 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 Q4G0T1 1027 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 SLFN13Q68D06 897 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 POTEBQ6S5H4 581 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 ETNPPLQ8TBG4 499 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 MXD3Q9BW11 206 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 RNF14Q9UBS8 474 aa12.55□□□□□ -0.4
C4orf3-201ENST00000399075 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.55□□□□□ -0.4
C4orf3-201ENST00000399075 MEIS2O14770 477 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 RPS6KA5O75582 802 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 SSBP05455 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 LMAN1P49257 510 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 DOK7Q18PE1 504 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 HERC4Q5GLZ8 1057 aaPredicted RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 ERMNQ8TAM6 284 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 AENQ8WTP8 325 aaKnown RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 GJA10Q969M2 543 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 FGFBP2Q9BYJ0 223 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 ZNF646O15015 1829 aaPredicted RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 TLR2O60603 784 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 MED24O75448 989 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 GTF2A1P52655 376 aaPredicted RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 ARHGAP4P98171 946 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 C2orf54Q08AI8 447 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 TATDN1Q6P1N9 297 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 KCTD17Q8N5Z5 321 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 LSM14BQ9BX40 385 aaKnown RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 AIPL1Q9NZN9 384 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 TNFRSF8P28908 595 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 ACTN2P35609 894 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 ARSHQ5FYA8 562 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
C4orf3-201ENST00000399075 NLGN1Q8N2Q7 840 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 AMNQ9BXJ7 453 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
C4orf3-201ENST00000399075 CETN3O15182 167 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 RPA1P27694 616 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 ZSCAN26Q16670 478 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
C4orf3-201ENST00000399075 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 ZFPM1Q8IX07 1006 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 FAM20AQ96MK3 541 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 SELENOOQ9BVL4 669 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
C4orf3-201ENST00000399075 GANQ9H2C0 597 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 SALL4Q9UJQ4 1053 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 SYF2O95926 243 aaKnown RBP12.53□□□□□ -0.4
C4orf3-201ENST00000399075 PDE6BP35913 854 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 SREBF1P36956 1147 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 SLC18A3Q16572 532 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 GLE1Q53GS7 698 aaKnown RBP12.53□□□□□ -0.4
C4orf3-201ENST00000399075 KLHDC7AQ5VTJ3 777 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 EPM2AIP1Q7L775 607 aaPredicted RBP12.53□□□□□ -0.4
C4orf3-201ENST00000399075 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 YY1AP1Q9H869 796 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 CWC15Q9P013 229 aaKnown RBP12.53□□□□□ -0.4
C4orf3-201ENST00000399075 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
C4orf3-201ENST00000399075 G3V3G9 751 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 PRPF6O94906 941 aaKnown RBP12.52□□□□□ -0.4
C4orf3-201ENST00000399075 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.4
C4orf3-201ENST00000399075 CIITAP33076 1130 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 PAFAH1B1P43034 410 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 POLR2FP61218 127 aaKnown RBP12.52□□□□□ -0.4
C4orf3-201ENST00000399075 RASSF7Q02833 373 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 ADAM9Q13443 819 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 NAB2Q15742 525 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 SIAH1Q8IUQ4 282 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 NELFCDQ8IXH7 590 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.4
C4orf3-201ENST00000399075 LENG9Q96B70 501 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 CRACR2AQ9BSW2 395 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 NLRC4Q9NPP4 1024 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 TBC1D7Q9P0N9 293 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 FEZ2Q9UHY8 353 aaPredicted RBP12.52□□□□□ -0.4
C4orf3-201ENST00000399075 MYH10P35580 1976 aa12.52□□□□□ -0.4
C4orf3-201ENST00000399075 COL2A1P02458 1487 aaPredicted RBP12.52□□□□□ -0.4
C4orf3-201ENST00000399075 ATP8B3O60423 1300 aa12.52□□□□□ -0.41
C4orf3-201ENST00000399075 NPHP3-ACAD11A0A0J9YXS1 232 aa12.52□□□□□ -0.41
C4orf3-201ENST00000399075 BTNL10A8MVZ5 291 aa12.52□□□□□ -0.41
C4orf3-201ENST00000399075 RNF40O75150 1001 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms