RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RIC8AQ9NPQ8 531 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 BARHL2Q9NY43 387 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 MUC6Q6W4X9 2439 aa15.36■□□□□ 0.05
VCX3A-202ENST00000398729 STXBP3O00186 592 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 MAFGO15525 162 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 FOSP01100 380 aaPredicted RBP15.35■□□□□ 0.05
VCX3A-202ENST00000398729 ITGB5P18084 799 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 ADD1P35611 737 aaKnown RBP15.35■□□□□ 0.05
VCX3A-202ENST00000398729 ADCY7P51828 1080 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 ZNF200P98182 395 aaPredicted RBP15.35■□□□□ 0.05
VCX3A-202ENST00000398729 SP4Q02446 784 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 TAP1Q03518 808 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 SKIV2LQ15477 1246 aaKnown RBP15.35■□□□□ 0.05
VCX3A-202ENST00000398729 AAK1Q2M2I8 961 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 TYW1BQ6NUM6 668 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 FBXL16Q8N461 479 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 KHSRPQ92945 711 aaKnown RBP eCLIP15.35■□□□□ 0.05
VCX3A-202ENST00000398729 JADE2Q9NQC1 790 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 PPP4R2Q9NY27 417 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 ZNF215Q9UL58 517 aaPredicted RBP15.35■□□□□ 0.05
VCX3A-202ENST00000398729 UBIAD1Q9Y5Z9 338 aa15.35■□□□□ 0.05
VCX3A-202ENST00000398729 C17orf102A2RUQ5 167 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 SMCO2A6NFE2 343 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 LPXNO60711 386 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 BAIAP3O94812 1187 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 KCNA2P16389 499 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 UTP14CQ5TAP6 766 aaKnown RBP15.34■□□□□ 0.05
VCX3A-202ENST00000398729 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 ATP6V0A1Q93050 837 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 SLC9A7Q96T83 725 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
VCX3A-202ENST00000398729 ATP9AO75110 1047 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 GNAT1P11488 350 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 SCG2P13521 617 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 AP3B2Q13367 1082 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 HIC1Q14526 733 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 PFKFB3Q16875 520 aaPredicted RBP15.33■□□□□ 0.04
VCX3A-202ENST00000398729 SERINC5Q86VE9 423 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 TRIM50Q86XT4 487 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 PHOSPHO2Q8TCD6 241 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 ANO3Q9BYT9 981 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 C11orf16Q9NQ32 467 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 COG5Q9UP83 839 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 NID2Q14112 1375 aa15.33■□□□□ 0.04
VCX3A-202ENST00000398729 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 HOXC8P31273 242 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 TCF7P36402 384 aaPredicted RBP15.32■□□□□ 0.04
VCX3A-202ENST00000398729 AKAP17AQ02040 695 aaKnown RBP15.32■□□□□ 0.04
VCX3A-202ENST00000398729 GPNMBQ14956 572 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 TRIM71Q2Q1W2 868 aaKnown RBP15.32■□□□□ 0.04
VCX3A-202ENST00000398729 ZNF618Q5T7W0 954 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 RUFY3Q7L099 469 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 HERC6Q8IVU3 1022 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 CCDC12Q8WUD4 166 aaPredicted RBP15.32■□□□□ 0.04
VCX3A-202ENST00000398729 ARNTL2Q8WYA1 636 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 SEPT1Q8WYJ6 367 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 WNT8BQ93098 351 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 PGBD1Q96JS3 809 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 MXRA8Q9BRK3 442 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 RNPEPQ9H4A4 650 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 CD320Q9NPF0 282 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 PKD2L1Q9P0L9 805 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 TELO2Q9Y4R8 837 aa15.32■□□□□ 0.04
VCX3A-202ENST00000398729 ARIH1Q9Y4X5 557 aaPredicted RBP15.32■□□□□ 0.04
VCX3A-202ENST00000398729 TREHO43280 583 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 PRPF3O43395 683 aaKnown RBP15.31■□□□□ 0.04
VCX3A-202ENST00000398729 GTPBP6O43824 516 aaPredicted RBP15.31■□□□□ 0.04
VCX3A-202ENST00000398729 NBNO60934 754 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 CXCL10P02778 98 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 SREBF1P36956 1147 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 THPOP40225 353 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 KCNJ6P48051 423 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
VCX3A-202ENST00000398729 GRB10Q13322 594 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 CNKSR3Q6P9H4 555 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 HLA-CQ95604 372 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 ZSWIM6Q9HCJ5 1215 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 KCNH7Q9NS40 1196 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 SETD4Q9NVD3 440 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 TMEM260Q9NX78 707 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 CYP46A1Q9Y6A2 500 aa15.31■□□□□ 0.04
VCX3A-202ENST00000398729 GSTTP1A0A1W2PQM5 241 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 RSPH10B2B2RC85 870 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 RSPH10BP0C881 870 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 ZNF76P36508 570 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 EVCP57679 992 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 CEP55Q53EZ4 464 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 MCTP2Q6DN12 878 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 TRAF7Q6Q0C0 670 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 NRCAMQ92823 1304 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 GLG1Q92896 1179 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 PHKBQ93100 1093 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 SDF4Q9BRK5 362 aa15.3■□□□□ 0.04
VCX3A-202ENST00000398729 RNF26Q9BY78 433 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms