RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 BCAS3Q9H6U6 928 aa28.89■■■□□ 2.22
U2AF1-203ENST00000398137 UBIAD1Q9Y5Z9 338 aa28.89■■■□□ 2.22
U2AF1-203ENST00000398137 TRIP12Q14669 1992 aaPredicted RBP28.88■■■□□ 2.21
U2AF1-203ENST00000398137 KIF28PB7ZC32 967 aa28.88■■■□□ 2.21
U2AF1-203ENST00000398137 HOXD8P13378 290 aaPredicted RBP28.88■■■□□ 2.21
U2AF1-203ENST00000398137 ITGB5P18084 799 aa28.88■■■□□ 2.21
U2AF1-203ENST00000398137 PDCP20941 246 aa28.88■■■□□ 2.21
U2AF1-203ENST00000398137 GNL2Q13823 731 aaKnown RBP28.88■■■□□ 2.21
U2AF1-203ENST00000398137 GNPTABQ3T906 1256 aa28.88■■■□□ 2.21
U2AF1-203ENST00000398137 MYSM1Q5VVJ2 828 aa28.88■■■□□ 2.21
U2AF1-203ENST00000398137 UNC80Q8N2C7 3258 aa28.88■■■□□ 2.21
U2AF1-203ENST00000398137 DOCK5Q9H7D0 1870 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 VPS37CA5D8V6 355 aaPredicted RBP28.87■■■□□ 2.21
U2AF1-203ENST00000398137 FGBP02675 491 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 CYP3A4P08684 503 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 ZNF76P36508 570 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 MCTP1Q6DN14 999 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 GDF6Q6KF10 455 aaPredicted RBP28.87■■■□□ 2.21
U2AF1-203ENST00000398137 OTOP2Q7RTS6 562 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 SESTD1Q86VW0 696 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 SLC17A8Q8NDX2 589 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 PPTC7Q8NI37 304 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 PBX4Q9BYU1 374 aa28.87■■■□□ 2.21
U2AF1-203ENST00000398137 FOXP1Q9H334 677 aaPredicted RBP28.87■■■□□ 2.21
U2AF1-203ENST00000398137 TMEM265A0A087WTH1 108 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 SORBS3O60504 671 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 UBA1P22314 1058 aaKnown RBP28.86■■■□□ 2.21
U2AF1-203ENST00000398137 LAMC2Q13753 1193 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 DGKDQ16760 1214 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 HSDL1Q3SXM5 330 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 CELF3Q5SZQ8 465 aaKnown RBP28.86■■■□□ 2.21
U2AF1-203ENST00000398137 NLRX1Q86UT6 975 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 CYP2W1Q8TAV3 490 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 MXRA8Q9BRK3 442 aa28.86■■■□□ 2.21
U2AF1-203ENST00000398137 TET1Q8NFU7 2136 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 RBAK-RBAKDNI3L0D1 243 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 HAS3O00219 553 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 EDIL3O43854 480 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 ZNF286BP0CG31 522 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 SYT1P21579 422 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 CHMP4BP1P59074 171 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 SEMA3FQ13275 785 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 CEP55Q53EZ4 464 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 DHX37Q8IY37 1157 aaKnown RBP28.85■■■□□ 2.21
U2AF1-203ENST00000398137 MYLIPQ8WY64 445 aa28.85■■■□□ 2.21
U2AF1-203ENST00000398137 FAM86B1E9PN63 330 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 FIBPO43427 364 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 GGPS1O95749 300 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 F2P00734 622 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 FAM86B2P0C5J1 330 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 ANP32AP39687 249 aaKnown RBP28.84■■■□□ 2.21
U2AF1-203ENST00000398137 MTMR1Q13613 665 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 GRIN2CQ14957 1233 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 NEK8Q86SG6 692 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 NOSTRINQ8IVI9 506 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 DHX38Q92620 1227 aaKnown RBP28.84■■■□□ 2.21
U2AF1-203ENST00000398137 GPRASP2Q96D09 838 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 JADE2Q9NQC1 790 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 CHD9Q3L8U1 2897 aa28.84■■■□□ 2.21
U2AF1-203ENST00000398137 PITPNM1O00562 1244 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 TDP2O95551 362 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 IQCF3P0C7M6 154 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 PSEN2P49810 448 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 USP11P51784 963 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 HIC1Q14526 733 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 PTGISQ16647 500 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 LETM2Q2VYF4 491 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 KCNV1Q6PIU1 500 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 TIFAQ96CG3 184 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 TSHZ2Q9NRE2 1034 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 PRUNE2Q8WUY3 3088 aa28.83■■■□□ 2.21
U2AF1-203ENST00000398137 IGLV3-22A0A075B6J6 115 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 SPATA31C2B4DYI2 1134 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 TGFB3P10600 412 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 U2AF2P26368 475 aaKnown RBP eCLIP28.82■■■□□ 2.2
U2AF1-203ENST00000398137 ICAM3P32942 547 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 CIITAP33076 1130 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 GPNMBQ14956 572 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 PRR16Q569H4 304 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 PLA2G4DQ86XP0 818 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 PKD2L1Q9P0L9 805 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 HDAC6Q9UBN7 1215 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 GTF2IRD1Q9UHL9 959 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 TELO2Q9Y4R8 837 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 A0A0C4DFX4 3053 aa28.82■■■□□ 2.2
U2AF1-203ENST00000398137 MEIS1O00470 390 aa28.81■■■□□ 2.2
U2AF1-203ENST00000398137 MFSD10Q14728 455 aa28.81■■■□□ 2.2
U2AF1-203ENST00000398137 NIPA1Q7RTP0 329 aa28.81■■■□□ 2.2
U2AF1-203ENST00000398137 DEFB128Q7Z7B8 93 aa28.81■■■□□ 2.2
U2AF1-203ENST00000398137 RPUSD2Q8IZ73 545 aaKnown RBP28.81■■■□□ 2.2
U2AF1-203ENST00000398137 SPATA33Q96N06 139 aa28.81■■■□□ 2.2
U2AF1-203ENST00000398137 C16orf70Q9BSU1 422 aa28.81■■■□□ 2.2
U2AF1-203ENST00000398137 ZNF576Q9H609 170 aa28.81■■■□□ 2.2
U2AF1-203ENST00000398137 PPFIA4O75335 1185 aa28.8■■■□□ 2.2
U2AF1-203ENST00000398137 ARP10275 920 aa28.8■■■□□ 2.2
U2AF1-203ENST00000398137 KIAA0753Q2KHM9 967 aa28.8■■■□□ 2.2
U2AF1-203ENST00000398137 CDHR1Q96JP9 859 aa28.8■■■□□ 2.2
U2AF1-203ENST00000398137 KCNH7Q9NS40 1196 aa28.8■■■□□ 2.2
U2AF1-203ENST00000398137 YBX2Q9Y2T7 364 aaKnown RBP28.8■■■□□ 2.2
U2AF1-203ENST00000398137 SETQ01105 290 aaPredicted RBP28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms