RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CYTH3O43739 400 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 CTNNB1P35222 781 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 IMMTQ16891 758 aaKnown RBP18.65■□□□□ 0.58
CUX2-202ENST00000397643 HFE2Q6ZVN8 426 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 CYB5R4Q7L1T6 521 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 HOMER1Q86YM7 354 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 PLEKHM2Q8IWE5 1019 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 SMC5Q8IY18 1101 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 FIBCD1Q8N539 461 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 IL17RAQ96F46 866 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 PIGSQ96S52 555 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 IL25Q9H293 177 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 OSBPL3Q9H4L5 887 aa18.65■□□□□ 0.58
CUX2-202ENST00000397643 NOP56O00567 594 aaKnown RBP18.64■□□□□ 0.57
CUX2-202ENST00000397643 TBX10O75333 385 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 CHRNA1P02708 482 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 RB1P06400 928 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 BMPR1AP36894 532 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 GRM4Q14833 912 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 CYFIP1Q7L576 1253 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 CLP1Q92989 425 aaKnown RBP18.64■□□□□ 0.57
CUX2-202ENST00000397643 LMAN2LQ9H0V9 348 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 CNNM2Q9H8M5 875 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 EHMT1Q9H9B1 1298 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 ADGRA3Q8IWK6 1321 aa18.64■□□□□ 0.57
CUX2-202ENST00000397643 TTC3P53804 2025 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 MBTPS2O43462 519 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 NCK2O43639 380 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 GNAT1P11488 350 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 MGAT3Q09327 533 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 NEDD9Q14511 834 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 CLUL1Q15846 466 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 GNPTABQ3T906 1256 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 CENPQQ7L2Z9 268 aaPredicted RBP18.63■□□□□ 0.57
CUX2-202ENST00000397643 C11orf84Q9BUA3 381 aaPredicted RBP18.63■□□□□ 0.57
CUX2-202ENST00000397643 DIAPH3Q9NSV4 1193 aa18.63■□□□□ 0.57
CUX2-202ENST00000397643 FIBPO43427 364 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 STAM2O75886 525 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 GHRP10912 638 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 GTF2F1P35269 517 aaKnown RBP eCLIP18.62■□□□□ 0.57
CUX2-202ENST00000397643 ARHGAP4P98171 946 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 CAMK1Q14012 370 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 HERC4Q5GLZ8 1057 aaPredicted RBP18.62■□□□□ 0.57
CUX2-202ENST00000397643 RUFY4Q6ZNE9 571 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 ZNF689Q96CS4 500 aaPredicted RBP18.62■□□□□ 0.57
CUX2-202ENST00000397643 SENP2Q9HC62 589 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 MUTYHQ9UIF7 546 aa18.62■□□□□ 0.57
CUX2-202ENST00000397643 ZNF215Q9UL58 517 aaPredicted RBP18.62■□□□□ 0.57
CUX2-202ENST00000397643 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
CUX2-202ENST00000397643 LINC01565O15544 149 aa18.61■□□□□ 0.57
CUX2-202ENST00000397643 SMAD4Q13485 552 aaKnown RBP18.61■□□□□ 0.57
CUX2-202ENST00000397643 LPIN1Q14693 890 aa18.61■□□□□ 0.57
CUX2-202ENST00000397643 RTEL1Q9NZ71 1219 aa18.61■□□□□ 0.57
CUX2-202ENST00000397643 RWDD3Q9Y3V2 267 aa18.61■□□□□ 0.57
CUX2-202ENST00000397643 GTF3C3Q9Y5Q9 886 aa18.61■□□□□ 0.57
CUX2-202ENST00000397643 NRCAMQ92823 1304 aa18.6■□□□□ 0.57
CUX2-202ENST00000397643 MMP1P03956 469 aa18.6■□□□□ 0.57
CUX2-202ENST00000397643 TROAPQ12815 778 aa18.6■□□□□ 0.57
CUX2-202ENST00000397643 TRAF1Q13077 416 aa18.6■□□□□ 0.57
CUX2-202ENST00000397643 UTP14CQ5TAP6 766 aaKnown RBP18.6■□□□□ 0.57
CUX2-202ENST00000397643 LINC01599Q8WXQ3 324 aa18.6■□□□□ 0.57
CUX2-202ENST00000397643 POP1Q99575 1024 aaKnown RBP18.6■□□□□ 0.57
CUX2-202ENST00000397643 SENP7Q9BQF6 1050 aa18.6■□□□□ 0.57
CUX2-202ENST00000397643 UPF3BQ9BZI7 483 aaKnown RBP18.6■□□□□ 0.57
CUX2-202ENST00000397643 KIAA1671Q9BY89 1806 aa18.6■□□□□ 0.57
CUX2-202ENST00000397643 KAT6AQ92794 2004 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 HIP1O00291 1037 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 ENPP3O14638 875 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 SP4Q02446 784 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 TAF2Q6P1X5 1199 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 CHD1LQ86WJ1 897 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 RNF135Q8IUD6 432 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 MSLNLQ96KJ4 702 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 ZDBF2Q9HCK1 2354 aa18.59■□□□□ 0.57
CUX2-202ENST00000397643 USP34Q70CQ2 3546 aa18.58■□□□□ 0.57
CUX2-202ENST00000397643 DGKIO75912 1065 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 CSPG5O95196 566 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 DNAJB1P25685 340 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 NUCB1Q02818 461 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 ADAM15Q13444 863 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 FBXO47Q5MNV8 452 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 PCNX4Q63HM2 1172 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 CRIPAKQ8N1N5 446 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 PLVAPQ9BX97 442 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 CD207Q9UJ71 328 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 PLAGL2Q9UPG8 496 aa18.58■□□□□ 0.56
CUX2-202ENST00000397643 MBLAC1A4D2B0 266 aaPredicted RBP18.57■□□□□ 0.56
CUX2-202ENST00000397643 EYA4O95677 639 aa18.57■□□□□ 0.56
CUX2-202ENST00000397643 TCF7P36402 384 aaPredicted RBP18.57■□□□□ 0.56
CUX2-202ENST00000397643 BTG3Q14201 252 aaPredicted RBP18.57■□□□□ 0.56
CUX2-202ENST00000397643 MARCH8Q5T0T0 291 aa18.57■□□□□ 0.56
CUX2-202ENST00000397643 MFSD14AQ96MC6 490 aa18.57■□□□□ 0.56
CUX2-202ENST00000397643 PHOX2BQ99453 314 aa18.57■□□□□ 0.56
CUX2-202ENST00000397643 AGO3Q9H9G7 860 aaKnown RBP18.57■□□□□ 0.56
CUX2-202ENST00000397643 ALG13Q9NP73 1137 aaKnown RBP18.57■□□□□ 0.56
CUX2-202ENST00000397643 MRPL42Q9Y6G3 142 aaKnown RBP18.57■□□□□ 0.56
CUX2-202ENST00000397643 STXBP3O00186 592 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 MEIS2O14770 477 aa18.56■□□□□ 0.56
CUX2-202ENST00000397643 ATP9AO75110 1047 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms