RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 IL17RAQ96F46 866 aa13.76□□□□□ -0.21
SYNE4-203ENST00000397428 YME1L1Q96TA2 773 aa13.76□□□□□ -0.21
SYNE4-203ENST00000397428 MTA3Q9BTC8 594 aa13.76□□□□□ -0.21
SYNE4-203ENST00000397428 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 GSTTP1A0A1W2PQM5 241 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 C5orf67F2Z3F1 127 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 ENPP3O14638 875 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 SGSM2O43147 1006 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 RB1P06400 928 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 CTSHP09668 335 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 LINC00271P0C7V0 271 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 IL9P15248 144 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 ARHGAP4P98171 946 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 UTP14CQ5TAP6 766 aaKnown RBP13.75□□□□□ -0.21
SYNE4-203ENST00000397428 NLRX1Q86UT6 975 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 TRIM50Q86XT4 487 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 SMARCC2Q8TAQ2 1214 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 CUL5Q93034 780 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 PABPC5Q96DU9 382 aaKnown RBP13.75□□□□□ -0.21
SYNE4-203ENST00000397428 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
SYNE4-203ENST00000397428 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
SYNE4-203ENST00000397428 LY9Q9HBG7 655 aa13.75□□□□□ -0.21
SYNE4-203ENST00000397428 ZNF215Q9UL58 517 aaPredicted RBP13.75□□□□□ -0.21
SYNE4-203ENST00000397428 DOCK5Q9H7D0 1870 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 MBLAC1A4D2B0 266 aaPredicted RBP13.74□□□□□ -0.21
SYNE4-203ENST00000397428 KCNA2P16389 499 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 ITGB5P18084 799 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 KIF5BP33176 963 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 BMPR1AP36894 532 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 MGAT3Q09327 533 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 TCEAL5Q5H9L2 206 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 MARCH8Q5T0T0 291 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 TAF2Q6P1X5 1199 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 ZNF654Q8IZM8 581 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 SRBD1Q8N5C6 995 aaKnown RBP13.74□□□□□ -0.21
SYNE4-203ENST00000397428 SEPT1Q8WYJ6 367 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 HCN4Q9Y3Q4 1203 aa13.74□□□□□ -0.21
SYNE4-203ENST00000397428 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
SYNE4-203ENST00000397428 MAFGO15525 162 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 NCK2O43639 380 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 DDAH1O94760 285 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 ALADP13716 330 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 TCF7P36402 384 aaPredicted RBP13.73□□□□□ -0.21
SYNE4-203ENST00000397428 LTBRP36941 435 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 GNAQP50148 359 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 LPIN1Q14693 890 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 CTC1Q2NKJ3 1217 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 RUFY4Q6ZNE9 571 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 CRIPAKQ8N1N5 446 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 FIBCD1Q8N539 461 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 CTCFLQ8NI51 663 aaPredicted RBP13.73□□□□□ -0.21
SYNE4-203ENST00000397428 CLP1Q92989 425 aaKnown RBP13.73□□□□□ -0.21
SYNE4-203ENST00000397428 ZNF689Q96CS4 500 aaPredicted RBP13.73□□□□□ -0.21
SYNE4-203ENST00000397428 CDHR1Q96JP9 859 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
SYNE4-203ENST00000397428 PSTPIP2Q9H939 334 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 RC3H2Q9HBD1 1191 aaKnown RBP13.73□□□□□ -0.21
SYNE4-203ENST00000397428 UBIAD1Q9Y5Z9 338 aa13.73□□□□□ -0.21
SYNE4-203ENST00000397428 FAM86C2PA6NEL3 165 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 PRR33A8MZF0 331 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 H3BQ06 376 aaPredicted RBP13.72□□□□□ -0.21
SYNE4-203ENST00000397428 RTN4RL1Q86UN2 441 aaPredicted RBP13.72□□□□□ -0.21
SYNE4-203ENST00000397428 MYL10Q9BUA6 226 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 LMAN2LQ9H0V9 348 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 SMARCAD1Q9H4L7 1026 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 ERAP1Q9NZ08 941 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
SYNE4-203ENST00000397428 RBM8AQ9Y5S9 174 aaKnown RBP13.72□□□□□ -0.21
SYNE4-203ENST00000397428 GRM6O15303 877 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 PRC1O43663 620 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 DGKIO75912 1065 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 PLEKHA8P1O95397 391 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 GHRP10912 638 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 LIFRP42702 1097 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 SP4Q02446 784 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 GRIK4Q16099 956 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 RSPH3Q86UC2 560 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 TMEM87BQ96K49 555 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 JADE2Q9NQC1 790 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
SYNE4-203ENST00000397428 SQORQ9Y6N5 450 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 BRWD1Q9NSI6 2320 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 RALGAPA2Q2PPJ7 1873 aa13.71□□□□□ -0.21
SYNE4-203ENST00000397428 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 KAT6AQ92794 2004 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 RPLP2P05387 115 aaKnown RBP13.7□□□□□ -0.22
SYNE4-203ENST00000397428 CALM1P0DP23 149 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 CALM2P0DP24 149 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 CALM3P0DP25 149 aa13.7□□□□□ -0.22
SYNE4-203ENST00000397428 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms