RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TRIM43Q96BQ3 446 aaPredicted RBP28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 AZI2Q9H6S1 392 aa28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 TRMT13Q9NUP7 481 aaKnown RBP28.74■■■□□ 2.19
TSPAN4-207ENST00000397411 KIAA0355O15063 1070 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 CCNT1O60563 726 aaKnown RBP28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 CD4P01730 458 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 GJB2P29033 226 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 ACTR2P61160 394 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 MOXD1Q6UVY6 613 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 FBXO18Q8NFZ0 1043 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 SMARCAD1Q9H4L7 1026 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 HDAC6Q9UBN7 1215 aa28.73■■■□□ 2.19
TSPAN4-207ENST00000397411 HAS3O00219 553 aa28.72■■■□□ 2.19
TSPAN4-207ENST00000397411 MSH4O15457 936 aa28.72■■■□□ 2.19
TSPAN4-207ENST00000397411 EDIL3O43854 480 aa28.72■■■□□ 2.19
TSPAN4-207ENST00000397411 GCFC2P16383 781 aaKnown RBP28.72■■■□□ 2.19
TSPAN4-207ENST00000397411 PTGISQ16647 500 aa28.72■■■□□ 2.19
TSPAN4-207ENST00000397411 CHRDL2Q6WN34 429 aa28.72■■■□□ 2.19
TSPAN4-207ENST00000397411 TRIM50Q86XT4 487 aa28.72■■■□□ 2.19
TSPAN4-207ENST00000397411 GAS7O60861 476 aa28.71■■■□□ 2.19
TSPAN4-207ENST00000397411 MAGEA10P43363 369 aaPredicted RBP28.71■■■□□ 2.19
TSPAN4-207ENST00000397411 EARS2Q5JPH6 523 aaKnown RBP28.71■■■□□ 2.19
TSPAN4-207ENST00000397411 MIS18BP1Q6P0N0 1132 aa28.71■■■□□ 2.19
TSPAN4-207ENST00000397411 BADQ92934 168 aa28.71■■■□□ 2.19
TSPAN4-207ENST00000397411 LENG9Q96B70 501 aa28.71■■■□□ 2.19
TSPAN4-207ENST00000397411 TEKT3Q9BXF9 490 aa28.71■■■□□ 2.19
TSPAN4-207ENST00000397411 H3BQV1 296 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 BACH1O14867 736 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 DHX15O43143 795 aaKnown RBP28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 KRT76Q01546 638 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 SESTD1Q86VW0 696 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 TNFRSF25Q93038 417 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 PPP1R12CQ9BZL4 782 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 ERAP1Q9NZ08 941 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 PCDH10Q9P2E7 1040 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 TBX21Q9UL17 535 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 SAMM50Q9Y512 469 aa28.7■■■□□ 2.18
TSPAN4-207ENST00000397411 KAT6AQ92794 2004 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 FAM205CA6NFA0 338 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 TIMP1P01033 207 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 LRCH2Q5VUJ6 765 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 FAM160B1Q5W0V3 765 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 PPP4R3AQ6IN85 833 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 GDF6Q6KF10 455 aaPredicted RBP28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 ZNF746Q6NUN9 644 aaPredicted RBP28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 SLC5A5Q92911 643 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 RIT2Q99578 217 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 UBE2OQ9C0C9 1292 aaKnown RBP28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 FOXP1Q9H334 677 aaPredicted RBP28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 HIPK3Q9H422 1215 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 GTF2IRD1Q9UHL9 959 aa28.69■■■□□ 2.18
TSPAN4-207ENST00000397411 C17orf102A2RUQ5 167 aa28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 BAG4O95429 457 aaKnown RBP28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 CCNE2O96020 404 aa28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 CYP2C9P11712 490 aa28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 ATP2B1P20020 1258 aa28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 MARK3P27448 753 aa28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 STAT5BP51692 787 aa28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 TNPO1Q92973 898 aaKnown RBP28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 MBOAT7Q96N66 472 aa28.68■■■□□ 2.18
TSPAN4-207ENST00000397411 SMIM10L2AP0DMW4 78 aa28.67■■■□□ 2.18
TSPAN4-207ENST00000397411 SMIM10L2BP0DMW5 78 aa28.67■■■□□ 2.18
TSPAN4-207ENST00000397411 GNAT1P11488 350 aa28.67■■■□□ 2.18
TSPAN4-207ENST00000397411 MCTP1Q6DN14 999 aa28.67■■■□□ 2.18
TSPAN4-207ENST00000397411 RETREG2Q8NC44 543 aa28.67■■■□□ 2.18
TSPAN4-207ENST00000397411 COLQQ9Y215 455 aaPredicted RBP28.67■■■□□ 2.18
TSPAN4-207ENST00000397411 K7ELQ4 463 aaPredicted RBP28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 CHMP2AO43633 222 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 SLC37A4O43826 429 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 LGR5O75473 907 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 ATG7O95352 703 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 PSAPP07602 524 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 CUL4AQ13619 759 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 LARP1BQ659C4 914 aaKnown RBP28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 ABHD15Q6UXT9 468 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 SMAP1Q8IYB5 467 aaPredicted RBP28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 TMEM199Q8N511 208 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 CCDC155Q8N6L0 562 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 GJA10Q969M2 543 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 GDF15Q99988 308 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 RNPEPQ9H4A4 650 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 ZNF302Q9NR11 478 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 PCDHA10Q9Y5I2 948 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 EMSYQ7Z589 1322 aa28.66■■■□□ 2.18
TSPAN4-207ENST00000397411 WDR64B1ANS9 1081 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 CYP2C18P33260 490 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 SWSAP1Q6NVH7 229 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 PLPPR4Q7Z2D5 763 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 HSCBQ8IWL3 235 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 ATP6V0A1Q93050 837 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 FAM20AQ96MK3 541 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 SETD4Q9NVD3 440 aa28.65■■■□□ 2.18
TSPAN4-207ENST00000397411 ITGB8P26012 769 aa28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 ZNF200P98182 395 aaPredicted RBP28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 FPGSQ05932 587 aa28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 BFSP2Q13515 415 aa28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 MFSD5Q6N075 450 aa28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 PDXDC2PQ6P474 469 aa28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 CKAP2LQ8IYA6 745 aa28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 PCYT2Q99447 389 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms